• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

具有增强结构稳定性的四膜虫核酶突变体的进化。

Evolution of Tetrahymena ribozyme mutants with increased structural stability.

作者信息

Guo Feng, Cech Thomas R

机构信息

Howard Hughes Medical Institute, Department of Chemistry and Biochemistry, University of Colorado, Boulder, Colorado 80309-0215, USA.

出版信息

Nat Struct Biol. 2002 Nov;9(11):855-61. doi: 10.1038/nsb850.

DOI:10.1038/nsb850
PMID:12368901
Abstract

Determining how large RNA molecules stabilize their tertiary structures is critical for understanding how they perform their biological functions. Here we use in vitro selection to identify active variants of the Tetrahymena ribozyme with increased stability. The mutant pool converged to a single family that shared nine mutations; an RNA representing the consensus sequence was structurally more stable by 10.5 degrees C and catalytically active at elevated temperatures. Remarkably, of the nine altered sites, most are already known to be involved in tertiary interactions, and the stabilizing mutations primarily improve the packing interactions in the molecular interior. The wild type ribozyme and the selected mutants provide pairs of mesophilic and thermophilic homologs for studying the origin of their thermal stability.

摘要

确定RNA大分子如何稳定其三级结构对于理解它们如何执行生物学功能至关重要。在这里,我们使用体外筛选来鉴定具有更高稳定性的嗜热四膜虫核酶的活性变体。突变体库汇聚到一个共有九个突变的单一家族;代表共有序列的RNA在结构上更稳定,提高了10.5摄氏度,并且在升高的温度下具有催化活性。值得注意的是,在这九个改变的位点中,大多数已知已经参与三级相互作用,并且稳定突变主要改善了分子内部的堆积相互作用。野生型核酶和选定的突变体为研究它们热稳定性的起源提供了嗜温和嗜热同源物对。

相似文献

1
Evolution of Tetrahymena ribozyme mutants with increased structural stability.具有增强结构稳定性的四膜虫核酶突变体的进化。
Nat Struct Biol. 2002 Nov;9(11):855-61. doi: 10.1038/nsb850.
2
Comparison of crystal structure interactions and thermodynamics for stabilizing mutations in the Tetrahymena ribozyme.嗜热四膜虫核酶中稳定突变的晶体结构相互作用与热力学比较。
RNA. 2006 Mar;12(3):387-95. doi: 10.1261/rna.2198206. Epub 2006 Jan 23.
3
Fast folding of a ribozyme by stabilizing core interactions: evidence for multiple folding pathways in RNA.通过稳定核心相互作用实现核酶的快速折叠:RNA中多种折叠途径的证据。
J Mol Biol. 2000 Feb 11;296(1):133-44. doi: 10.1006/jmbi.1999.3439.
4
Probing the folding landscape of the Tetrahymena ribozyme: commitment to form the native conformation is late in the folding pathway.探索嗜热四膜虫核酶的折叠过程:形成天然构象的决定性步骤在折叠途径中较晚发生。
J Mol Biol. 2001 May 18;308(5):839-51. doi: 10.1006/jmbi.2001.4751.
5
The effect of long-range loop-loop interactions on folding of the Tetrahymena self-splicing RNA.远距离环-环相互作用对嗜热四膜虫自我剪接RNA折叠的影响。
J Mol Biol. 1999 Dec 10;294(4):955-65. doi: 10.1006/jmbi.1999.3298.
6
Generation of a catalytic module on a self-folding RNA.在自我折叠RNA上生成催化模块。
RNA. 2004 Dec;10(12):1900-6. doi: 10.1261/rna.7170304. Epub 2004 Nov 3.
7
Relationship between the self-splicing activity and the solidity of the master domain of the Tetrahymena group I ribozyme.嗜热四膜虫I组核酶自剪接活性与其主结构域稳定性之间的关系。
Biochem Biophys Res Commun. 2002 Mar 15;291(5):1225-31. doi: 10.1006/bbrc.2002.6609.
8
Monovalent ion-mediated folding of the Tetrahymena thermophila ribozyme.嗜热四膜虫核酶的单价离子介导折叠
J Mol Biol. 2004 Oct 1;342(5):1431-42. doi: 10.1016/j.jmb.2004.07.092.
9
A minor groove RNA triple helix within the catalytic core of a group I intron.I组内含子催化核心内的小沟RNA三链螺旋。
Nat Struct Biol. 1998 Dec;5(12):1037-42. doi: 10.1038/4146.
10
Concerted kinetic folding of a multidomain ribozyme with a disrupted loop-receptor interaction.具有破坏的环-受体相互作用的多结构域核酶的协同动力学折叠
J Mol Biol. 2001 Jan 5;305(1):11-21. doi: 10.1006/jmbi.2000.4253.

引用本文的文献

1
Thermodynamic compensation to temperature extremes in B. subtilis vs T. maritima lysine riboswitches.枯草芽孢杆菌与海栖热袍菌赖氨酸合成酶基因调控元件对极端温度的热力学补偿。
Biophys J. 2024 Oct 1;123(19):3331-3345. doi: 10.1016/j.bpj.2024.07.039. Epub 2024 Jul 31.
2
Pushing the Limits of Nucleic Acid Function.推动核酸功能的极限。
Chemistry. 2022 Dec 20;28(71):e202201737. doi: 10.1002/chem.202201737. Epub 2022 Oct 26.
3
Experimental Evolution in .《实验进化》中的(此处原文不完整,无法准确翻译“in.”后面的内容)
Microorganisms. 2022 Feb 11;10(2):414. doi: 10.3390/microorganisms10020414.
4
Nucleic Acid Catalysis under Potential Prebiotic Conditions.潜在的原始条件下的核酸催化作用。
Chem Asian J. 2020 Jan 17;15(2):214-230. doi: 10.1002/asia.201901205. Epub 2019 Dec 9.
5
Selecting New RNA Crystal Contacts.选择新的 RNA 晶体接触。
Structure. 2018 Sep 4;26(9):1166-1167. doi: 10.1016/j.str.2018.08.009.
6
In Crystallo Selection to Establish New RNA Crystal Contacts.在晶体选择中建立新的 RNA 晶体接触。
Structure. 2018 Sep 4;26(9):1275-1283.e3. doi: 10.1016/j.str.2018.05.005. Epub 2018 Jun 14.
7
New algorithms to represent complex pseudoknotted RNA structures in dot-bracket notation.用于在点棒记法中表示复杂假结 RNA 结构的新算法。
Bioinformatics. 2018 Apr 15;34(8):1304-1312. doi: 10.1093/bioinformatics/btx783.
8
Primordial soup or vinaigrette: did the RNA world evolve at acidic pH?原始汤还是油醋汁:RNA 世界是在酸性 pH 值下进化的吗?
Biol Direct. 2012 Jan 20;7:4. doi: 10.1186/1745-6150-7-4.
9
Strategies for articulated multibody-based adaptive coarse grain simulation of RNA.基于铰接多体的RNA自适应粗粒度模拟策略。
Methods Enzymol. 2011;487:73-98. doi: 10.1016/B978-0-12-381270-4.00003-2.
10
Enhanced specificity against misfolding in a thermostable mutant of the Tetrahymena ribozyme.热稳定突变体 Tetrahymena 核酶对错误折叠的增强特异性。
Biochemistry. 2011 Feb 8;50(5):864-74. doi: 10.1021/bi101467q. Epub 2011 Jan 11.