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豆科植物凝集素折叠结构域与其他果冻卷结构域的序列关系。

Sequence relationships in the legume lectin fold and other jelly rolls.

作者信息

Williams A, Westhead D R

机构信息

School of Biochemistry and Molecular Biology, University of Leeds, Leeds LS2 9JT, UK.

出版信息

Protein Eng. 2002 Oct;15(10):771-4. doi: 10.1093/protein/15.10.771.

DOI:10.1093/protein/15.10.771
PMID:12468709
Abstract

Distant sequence relationships in proteins containing the beta jelly-roll fold were investigated using sensitive sequence comparison methods, including PSI-BLAST and Hidden Markov Models. A relationship was identified between the rmlC-like and phosphomannose isomerase SCOP (version 1.53) superfamilies, which were merged in the most recent SCOP release. No other distant sequence relationships linking jelly roll superfamilies were found.

摘要

利用敏感的序列比较方法,包括PSI-BLAST和隐马尔可夫模型,研究了含有β果冻卷折叠的蛋白质中的远距离序列关系。在rmlC样和磷酸甘露糖异构酶SCOP(版本1.53)超家族之间发现了一种关系,它们在最新的SCOP版本中合并。未发现连接果冻卷超家族的其他远距离序列关系。

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