Witmer Xiaohong, Alvarez-Venegas Raul, San-Miguel Phillip, Danilevskaya Olga, Avramova Zoya
Department of Biological Sciences, Purdue University, West Lafayette, IN 47907, USA.
Nucleic Acids Res. 2003 Jan 15;31(2):619-28. doi: 10.1093/nar/gkg138.
The finding in animal species of complexes homologous to the products of six Saccharomyces cerevisiae genes, origin of replication recognition complex (ORC), has suggested that ORC-related mechanisms have been conserved in all eukaryotes. In plants, however, the only cloned putative homologs of ORC subunits are the Arabidopsis ORC2 and the rice ORC1. Homologs of other subunits of plant origin have not been cloned and characterized. A striking observation was the absence from the Arabidopsis genome of an obvious candidate gene-homolog of ORC4. This fact raised compelling questions of whether plants, in general, and Arabidopsis, in particular, may have lost the ORC4 gene, whether ORC-homologous subunits function within a complex in plants, whether an ORC complex may form and function without an ORC4 subunit, whether a functional (but not sequence) protein homolog may have taken up the role of ORC4 in Arabidopsis, and whether lack of ORC4 is a plant feature, in general. Here, we report the first cloned and molecularly characterized five genes coding for the maize putative homologs of ORC subunits ZmORC1, ZmORC2, ZmORC3, ZmORC4 and ZmORC5. Their expression profiles in tissues with different cell-dividing activities are compatible with a role in DNA replication. Based on the potential of ORC-homologous maize proteins to bind each other in yeast, we propose a model for their possible assembly within a maize ORC. The isolation and molecular characterization of an ORC4-homologous gene from maize argues that, in its evolution, Arabidopsis may have lost the homologous ORC4 gene.
在动物物种中发现了与酿酒酵母六个基因(复制起点识别复合体,即ORC)的产物同源的复合体,这表明与ORC相关的机制在所有真核生物中都得到了保守。然而,在植物中,唯一克隆的ORC亚基假定同源物是拟南芥ORC2和水稻ORC1。植物来源的其他亚基的同源物尚未被克隆和表征。一个引人注目的观察结果是,拟南芥基因组中没有明显的ORC4候选基因同源物。这一事实引发了令人信服的问题:一般来说植物,特别是拟南芥,是否可能已经丢失了ORC4基因;ORC同源亚基在植物的复合体中是否发挥作用;ORC复合体是否可以在没有ORC4亚基的情况下形成并发挥功能;是否有一个功能(但不是序列)蛋白同源物在拟南芥中承担了ORC4的角色;以及缺乏ORC4是否一般是植物的特征。在这里,我们报告了首次克隆并进行分子表征的五个基因,它们编码玉米ORC亚基ZmORC1、ZmORC2、ZmORC3、ZmORC4和ZmORC5的假定同源物。它们在具有不同细胞分裂活性的组织中的表达谱与在DNA复制中的作用相符。基于玉米ORC同源蛋白在酵母中相互结合的潜力,我们提出了一个它们在玉米ORC中可能组装的模型。从玉米中分离和分子表征ORC4同源基因表明,在其进化过程中,拟南芥可能已经丢失了同源的ORC4基因。