Takahashi Takuya, Kuyucak Serdar
Research Center for Computational Science, Okazaki National Research Institute, 38, Aza-Saigou-naka, Myodaiji-machi, Okazaki, Aichi, 444-8585, Japan.
Biophys J. 2003 Apr;84(4):2256-63. doi: 10.1016/S0006-3495(03)75031-0.
The iron storage protein ferritin contains threefold and fourfold symmetric channels that are thought to provide pathways for the transfer of Fe(2+) ions in and out of the protein. Using the known crystal structure of the ferritin protein, we perform electrostatic potential energy calculations to elucidate the functional properties of these channels. The threefold channel is shown to be responsible for the transit of Fe(2+) ions. Monovalent ions can also diffuse through the threefold channel but presence of divalent ions in the pore retards this process leading to a selectivity mechanism similar to the one observed in calcium channels. The fourfold channel is found to be impermeant to all cations with the possible exception of protons. Because proton transfer is essential to maintain the electroneutrality of the protein during iron deposition, we suggest that the function of the fourfold channel is to form a "proton wire" that facilitates their transfer in and out of ferritin.
铁储存蛋白铁蛋白含有三重对称和四重对称通道,据认为这些通道为Fe(2+)离子进出该蛋白提供了途径。利用铁蛋白已知的晶体结构,我们进行了静电势能计算,以阐明这些通道的功能特性。结果表明,三重通道负责Fe(2+)离子的转运。单价离子也可以通过三重通道扩散,但孔中存在二价离子会阻碍这一过程,从而导致一种类似于在钙通道中观察到的选择性机制。发现四重通道对所有阳离子(质子可能除外)均不通透。由于质子转移对于在铁沉积过程中维持蛋白的电中性至关重要,我们认为四重通道的功能是形成一条“质子线”,以促进质子进出铁蛋白。