Eichinger Ludwig, Noegel Angelika A
Center for Biochemistry, Medical Faculty, University of Cologne, Joseph-Stelzmann-Strasse 52, D-50931 Köln, Germany.
EMBO J. 2003 May 1;22(9):1941-6. doi: 10.1093/emboj/cdg214.
The social amoeba Dictyostelium discoideum is a well-established model organism for the study of basic aspects of differentiation, signal transduction, phagocytosis, cytokinesis and cell motility. Its genome is being sequenced by an international consortium using a whole chromosome shotgun approach. The pacemaker of the D.discoideum genome project has been chromosome 2, the largest chromosome, which at 8 Mb represents approximately 25% of the genome and whose sequence and analysis have been published recently. Chromosomes 1 and 6 are close to being finished. To accelerate completion of the genome sequence, the next step in the project will be a whole-genome assembly followed by the analysis of the complete gene content. The completed genome sequence and its analysis provide the basis for genome-wide functional studies. It will position Dictyostelium at the same level as other model organisms and further enhance its experimental attractiveness.
社会变形虫盘基网柄菌是研究分化、信号转导、吞噬作用、胞质分裂和细胞运动等基本方面的成熟模式生物。一个国际联盟正在使用全染色体鸟枪法对其基因组进行测序。盘基网柄菌基因组计划的核心是2号染色体,它是最大的染色体,长度为8兆碱基,约占基因组的25%,其序列和分析最近已经发表。1号和6号染色体已接近完成测序。为了加速基因组序列的完成,该项目的下一步将是进行全基因组组装,随后分析完整的基因内容。完整的基因组序列及其分析为全基因组功能研究提供了基础。这将使盘基网柄菌与其他模式生物处于同一水平,并进一步增强其作为实验对象的吸引力。