Ricagno Stefano, Jonsson Stefan, Richards Nigel, Lindqvist Ylva
Department of Medical Biochemistry and Biophysics, Karolinska Institutet, S-17177 Stockholm, Sweden.
EMBO J. 2003 Jul 1;22(13):3210-9. doi: 10.1093/emboj/cdg333.
Formyl-CoA transferase catalyses transfer of CoA from formate to oxalate in the first step of oxalate degradation by Oxalobacter formigenes, a bacterium present in the intestinal flora which is implicated in oxalate catabolism in mammals. Formyl-CoA transferase is a member of a family of CoA-transferases for which no structural information is available. We now report the three-dimensional structure of O.formigenes formyl-CoA transferase, which reveals a novel fold and a very striking assembly of the homodimer. The subunit is composed of a large and a small domain where residues from both the N- and C-termini of the subunit are part of the large domain. The linkers between the domains give the subunit a circular shape with a hole in the middle. The enzyme monomers are tightly interacting and are interlocked. This fold requires drastic rearrangement of approximately 75 residues at the C-terminus for formation of the dimer. The structure of a complex of formyl-CoA transferase with CoA is also reported and sets the scene for a mechanistic understanding of enzymes of this family of CoA-transferases.
在产甲酸草酸杆菌降解草酸盐的第一步中,甲酰辅酶A转移酶催化辅酶A从甲酸转移至草酸盐,产甲酸草酸杆菌是一种存在于肠道菌群中的细菌,与哺乳动物草酸盐分解代谢有关。甲酰辅酶A转移酶是辅酶A转移酶家族的一员,目前尚无关于该家族的结构信息。我们现在报道产甲酸草酸杆菌甲酰辅酶A转移酶的三维结构,该结构揭示了一种新颖的折叠方式以及同型二聚体非常显著的组装形式。亚基由一个大结构域和一个小结构域组成,亚基N端和C端的残基均属于大结构域的一部分。结构域之间的连接子使亚基呈中间有孔的圆形。酶单体紧密相互作用并相互连锁。这种折叠方式需要C端约75个残基进行剧烈重排以形成二聚体。本文还报道了甲酰辅酶A转移酶与辅酶A复合物的结构,为从机制上理解该辅酶A转移酶家族的酶奠定了基础。