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两种溶菌酶中的静电力:组氨酸pKa值的计算与测量

Electrostatic forces in two lysozymes: calculations and measurements of histidine pKa values.

作者信息

Takahashi T, Nakamura H, Wada A

机构信息

Department of Physics, Faculty of Science, University of Tokyo, Japan.

出版信息

Biopolymers. 1992 Aug;32(8):897-909. doi: 10.1002/bip.360320802.

Abstract

In order to examine the electrostatic forces in globular proteins, pKa values and their ionic strength dependence of His residues of hen egg white lysozyme (HEWL) and human lysozyme (HUML) were measured, and they were compared with those calculated numerically. pKa values of His residues in HEWL, HUML, and short oligopeptides were determined from chemical shift changes of His side chains by 1H-nmr measurements. The associated changes in pKa values in HEWL and HUML were calculated by solving the Poisson-Boltzmann equations numerically for macroscopic dielectric models. The calculated pKa changes and their ionic strength dependence agreed fairly well with the observed ones. The contribution from each residue of each alpha-helix dipole to the pKa values and their ionic strength dependence was analyzed using Green's reciprocity theorem. The results indicate that (1) the pKa of His residues are largely affected by surrounding ionized and polar groups; (2) the ionic strength dependence of the pKa values is determined by the overall charge distributions and their accessibilities to solvent; and (3) alpha-helix dipoles make a significant contribution to the pKa, when the His residue is close to the helix terminus and not fully exposed to the solvent.

摘要

为了研究球状蛋白质中的静电力,我们测量了鸡蛋清溶菌酶(HEWL)和人溶菌酶(HUML)中组氨酸残基的pKa值及其对离子强度的依赖性,并将其与数值计算结果进行了比较。通过1H-nmr测量组氨酸侧链的化学位移变化,确定了HEWL、HUML和短寡肽中组氨酸残基的pKa值。通过对宏观介电模型数值求解泊松-玻尔兹曼方程,计算了HEWL和HUML中pKa值的相关变化。计算得到的pKa变化及其对离子强度的依赖性与观测结果相当吻合。利用格林互易定理分析了每个α-螺旋偶极子中每个残基对pKa值及其对离子强度依赖性的贡献。结果表明:(1)组氨酸残基的pKa值受周围离子化和极性基团的影响很大;(2)pKa值对离子强度的依赖性由整体电荷分布及其对溶剂的可及性决定;(3)当组氨酸残基靠近螺旋末端且未完全暴露于溶剂时,α-螺旋偶极子对pKa有显著贡献。

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