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伊比利亚猪与其他家猪和野猪种群之间的线粒体DNA序列变异及系统发育关系。

Mitochondrial DNA sequence variation and phylogenetic relationships among Iberian pigs and other domestic and wild pig populations.

作者信息

Alves E, Ovilo C, Rodríguez M C, Silió L

机构信息

Departamento de Mejora Genética Animal, INIA, Madrid, Spain.

出版信息

Anim Genet. 2003 Oct;34(5):319-24. doi: 10.1046/j.1365-2052.2003.01010.x.

Abstract

Nucleotide sequences of mitochondrial DNA (mtDNA) cytochrome B gene (1140 bp) and control region (707 bp) were used to determine the phylogenetic relationships among 51 pig samples representing ancient and current varieties of Iberian pigs (26), Spanish wild boars (seven) and other domestic pigs (18) of cosmopolitan (Duroc, Large White, Landrace, Pietrain and Meishan) and local (Spotted Black Jabugo, Basque and Mangalitza) breeds. A neighbour-joining tree constructed from pairwise distances provide evidence of the European origin of both Iberian pigs and Spanish wild boars. The introgression of Asian mtDNA haplotypes in the genetic pool of the Iberian breed seems unlikely. Four estimates of sequence divergence between European and Asian clades were calculated from the two main domains of the D-loop region and the synonymous and nonsynonymous nucleotide substitutions in the cytochrome B gene. The time since the divergence of pig ancestors was estimated at about 600,000 years before present.

摘要

利用线粒体DNA(mtDNA)细胞色素B基因(1140 bp)和控制区(707 bp)的核苷酸序列,确定了51个猪样本之间的系统发育关系,这些样本代表了伊比利亚猪的古代和现代品种(26个)、西班牙野猪(7个)以及其他家猪品种(18个),包括世界性品种(杜洛克、大白猪、长白猪、皮特兰和梅山猪)和地方品种(斑点黑贾布戈猪、巴斯克猪和曼加利察猪)。根据成对距离构建的邻接树为伊比利亚猪和西班牙野猪的欧洲起源提供了证据。亚洲mtDNA单倍型渗入伊比利亚品种基因库的可能性似乎不大。从D-loop区域的两个主要结构域以及细胞色素B基因中的同义核苷酸替换和非同义核苷酸替换,计算了欧洲和亚洲分支之间的四个序列分歧估计值。猪祖先分歧以来的时间估计约为距今60万年。

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