使用新型GeneLibrarian模块3.1.2的TRUGENE HCV 5'NC基因分型试剂盒对临床标本中的丙型肝炎病毒进行基因分型的评估。
Evaluation of the TRUGENE HCV 5'NC genotyping kit with the new GeneLibrarian module 3.1.2 for genotyping of hepatitis C virus from clinical specimens.
作者信息
Germer Jeffrey J, Majewski David W, Rosser Michael, Thompson Amber, Mitchell P Shawn, Smith Thomas F, Elagin Slava, Yao Joseph D C
机构信息
Division of Clinical Microbiology, Mayo Clinic, Rochester, Minnesota 55905, USA.
出版信息
J Clin Microbiol. 2003 Oct;41(10):4855-7. doi: 10.1128/JCM.41.10.4855-4857.2003.
Abstract
The TRUGENE HCV 5'NC genotyping kit (GeneLibrarian modules 3.1.1 and 3.1.2) and VERSANT HCV genotyping assay were compared by using 96 hepatitis C virus (HCV) RNA-positive patient specimens, including HCV genotypes 1, 2, 3, 4, 5, 6, and 10. The TRUGENE HCV 5'NC genotyping kit (GeneLibrarian module 3.1.2) yielded the most accurate genotyping results.
摘要
采用96份丙型肝炎病毒（HCV）RNA阳性患者样本（包括HCV 1、2、3、4、5、6和10型），对TRUGENE HCV 5'NC基因分型试剂盒（GeneLibrarian模块3.1.1和3.1.2）和VERSANT HCV基因分型检测方法进行了比较。TRUGENE HCV 5'NC基因分型试剂盒（GeneLibrarian模块3.1.2）产生了最准确的基因分型结果。
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本文引用的文献
1
Clinical evaluation of two methods for genotyping hepatitis C virus based on analysis of the 5' noncoding region.基于5'非编码区分析的两种丙型肝炎病毒基因分型方法的临床评估
J Clin Microbiol. 2003 Apr;41(4):1558-64. doi: 10.1128/JCM.41.4.1558-1564.2003.
2
National Institutes of Health Consensus Development Conference Statement: Management of hepatitis C: 2002--June 10-12, 2002.美国国立卫生研究院共识发展会议声明：丙型肝炎的管理：2002年——2002年6月10日至12日
Hepatology. 2002 Nov;36(5 Suppl 1):S3-20. doi: 10.1053/jhep.2002.37117.
3
Performance of TRUGENE hepatitis C virus 5' noncoding genotyping kit, a new CLIP sequencing-based assay for hepatitis C virus genotype determination.TRUGENE丙型肝炎病毒5'非编码区基因分型试剂盒的性能，一种基于CLIP测序的新型丙型肝炎病毒基因分型检测方法。
J Viral Hepat. 2002 Sep;9(5):385-9. doi: 10.1046/j.1365-2893.2002.00362.x.
4
Hepatitis C virus genotyping based on 5' noncoding sequence analysis (Trugene).基于5'非编码序列分析的丙型肝炎病毒基因分型（Trugene法）
J Clin Microbiol. 2001 May;39(5):1771-3. doi: 10.1128/JCM.39.5.1771-1773.2001.
5
Evaluation of a new hepatitis C virus sequencing assay as a routine method for genotyping.评估一种新型丙型肝炎病毒测序检测方法作为基因分型常规方法的性能。
J Med Virol. 2001 Jan;63(1):17-21.
6
Genotyping of hepatitis C virus isolates using CLIP sequencing.使用CLIP测序对丙型肝炎病毒分离株进行基因分型。
J Clin Microbiol. 2000 Oct;38(10):3581-4. doi: 10.1128/JCM.38.10.3581-3584.2000.
7
Determination of hepatitis C virus genotype by direct sequence analysis of products generated with the Amplicor HCV test.通过对使用Amplicor HCV检测试剂盒所产生的产物进行直接序列分析来确定丙型肝炎病毒基因型。
J Clin Microbiol. 1999 Aug;37(8):2625-30. doi: 10.1128/JCM.37.8.2625-2630.1999.
8
9
Classification, nomenclature, and database development for hepatitis C virus (HCV) and related viruses: proposals for standardization. International Committee on Virus Taxonomy.丙型肝炎病毒（HCV）及相关病毒的分类、命名和数据库开发：标准化建议。国际病毒分类委员会。
Arch Virol. 1998;143(12):2493-503. doi: 10.1007/s007050050479.
10
Hepatitis C genotyping by direct sequencing of the product from the Roche AMPLICOR test: methodology and application to a South Australian population.通过对罗氏AMPLICOR检测产物进行直接测序进行丙型肝炎基因分型：方法及在南澳大利亚人群中的应用
Pathology. 1998 May;30(2):192-5. doi: 10.1080/00313029800169226.
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