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高质量硫代磷酸酯寡核苷酸作为反义药物的合成。I-连接体在消除3'-末端硫代磷酸单酯中的应用。

Synthesis of high quality phosphorothioate oligonucleotides as antisense drugs. Use of I-linker in the elimination of 3'-terminal phosphorothioate monoesters.

作者信息

Ravikumar Vasulinga T, Kumar R Krishna, Capaldi Daniel C, Cole Douglas L

机构信息

Isis Pharmaceuticals, Carlsbad, California 92009, USA.

出版信息

Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1421-5. doi: 10.1081/NCN-120023000.

DOI:10.1081/NCN-120023000
PMID:14565433
Abstract

Detritylation of a 5'-O-DMT-2'-deoxyadenosine moiety attached to solid support under acidic condition leads to depurination during oligonucleotide synthesis. Deprotection followed by reversed phase HPLC purification leads to desired oligonucleotide contaminated with significant levels of 3'-terminal phosphorothiaote (3'-TPT) monoester (n-1)-mer. However, it is demonstrated that attachment of dA nucleoside through its exocyclic amino group to solid support leads to substantial reduction of 3'-TPT formation thereby improving the quality of oligonucleotide synthesized.

摘要

在酸性条件下,连接在固相载体上的5'-O-DMT-2'-脱氧腺苷部分的去三苯甲基化反应会导致在寡核苷酸合成过程中发生脱嘌呤现象。脱保护后通过反相高效液相色谱法纯化,得到的目标寡核苷酸会被大量的3'-末端硫代磷酸酯(3'-TPT)单酯(n-1)-聚体污染。然而,已证明通过其环外氨基将dA核苷连接到固相载体上会导致3'-TPT形成量大幅减少,从而提高合成寡核苷酸的质量。

相似文献

1
Synthesis of high quality phosphorothioate oligonucleotides as antisense drugs. Use of I-linker in the elimination of 3'-terminal phosphorothioate monoesters.高质量硫代磷酸酯寡核苷酸作为反义药物的合成。I-连接体在消除3'-末端硫代磷酸单酯中的应用。
Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):1421-5. doi: 10.1081/NCN-120023000.
2
A novel universal linker for efficient synthesis of phosphorothioate oligonucleotides.一种用于高效合成硫代磷酸酯寡核苷酸的新型通用连接子。
Nucleosides Nucleotides Nucleic Acids. 2007;26(3):259-69. doi: 10.1080/15257770701257277.
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Stepwise synthesis of oligonucleotide-peptide conjugates containing guanidinium and lipophilic groups in their 3'-termini.3’-末端含胍基和脂环族基团的寡核苷酸-肽缀合物的逐步合成。
Bioorg Med Chem Lett. 2010 Apr 1;20(7):2144-7. doi: 10.1016/j.bmcl.2010.02.049. Epub 2010 Feb 14.
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Synthesis of antisense oligonucleotides with minimum depurination.具有最小脱嘌呤作用的反义寡核苷酸的合成。
Nucleosides Nucleotides Nucleic Acids. 2003 Feb;22(2):129-34. doi: 10.1081/NCN-120019499.
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A short, novel, and cheaper procedure for oligonucleotide synthesis using automated solid phase synthesizer.一种使用自动固相合成仪进行寡核苷酸合成的简短、新颖且成本较低的方法。
Nucleosides Nucleotides Nucleic Acids. 2003 May-Aug;22(5-8):629-33. doi: 10.1081/NCN-120021968.
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Diastereomeric process control in the synthesis of 2'-O-(2-methoxyethyl) oligoribonucleotide phosphorothioates as antisense drugs.
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Synthesis of oligonucleotides containing 3'-alkylcarboxylic acids using a palladium labile oligonucleotide solid phase synthesis support.使用钯不稳定寡核苷酸固相合成载体合成含3'-烷基羧酸的寡核苷酸。
Bioconjug Chem. 1997 Mar-Apr;8(2):99-102. doi: 10.1021/bc970013a.
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Antisense oligonucleotides: efficient synthesis of 2'-O-methoxyethyl phosphorothioate oligonucleotides using 4,5-dicyanoimidazole. Are these oligonucleotides comparable to those synthesized using 1H-tetrazole as coupling activator?反义寡核苷酸:使用4,5-二氰基咪唑高效合成2'-O-甲氧基乙基硫代磷酸酯寡核苷酸。这些寡核苷酸与使用1H-四氮唑作为偶联活化剂合成的寡核苷酸相比如何?
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Synthesis of 5'-phosphorylated oligonucleotides on a polymer support.
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Synthesis and purification in a single column on a high-throughput automated oligonucleotide production system.在高通量自动化寡核苷酸生产系统的单个柱中进行合成和纯化。
Nucleic Acids Symp Ser. 1995(34):183-4.

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