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拟南芥中蔗糖合酶多基因家族的结构与表达谱

Structure and expression profile of the sucrose synthase multigene family in Arabidopsis.

作者信息

Baud Sébastien, Vaultier Marie-Noëlle, Rochat Christine

机构信息

Unité de Biologie des Semences, UMR 204, INA-PG-INRA, RD 10, 78026 Versailles cedex, France.

出版信息

J Exp Bot. 2004 Feb;55(396):397-409. doi: 10.1093/jxb/erh047.

DOI:10.1093/jxb/erh047
PMID:14739263
Abstract

The release of the complete genome sequence of Arabidopsis enabled the largest sucrose synthase family described to date, comprising six distinct members, for which expression profiles were not yet available, to be identified. Aimed at understanding the precise function of each AtSUS member among the family, a comparative study of protein structure was performed, together with an expression profiling of the whole gene family using the technique of real-time quantitative reverse transcriptase-polymerase chain reaction. Transcript levels were analysed in several plant organs, including both developing and germinating seeds. A series of treatments such as oxygen deprivation, dehydration, cold treatment, or various sugar feedings were then carried out to characterize the members of the family further. The AtSUS genes exhibit distinct but partially redundant expression profiles. Under anaerobic conditions, for instance, both AtSUS1 and AtSUS4 mRNA levels increase, but in a distinct manner. AtSUS2 is specifically and highly induced in seeds at 12 d after flowering and appears as a marker of seed maturation. AtSUS3 seems to be induced in various organs under dehydration conditions including leaves deprived of water or submitted to osmotic stress as well as late-maturing seeds. AtSUS5 and AtSUS6 are expressed in nearly all plant organs and do not exhibit any transcriptional response to stresses. These results add new insights on the expression of SUS genes and are discussed in relation to distinct functions for each member of the AtSUS family.

摘要

拟南芥完整基因组序列的公布,使得迄今所描述的最大的蔗糖合酶家族得以确定,该家族由六个不同成员组成,其表达谱此前尚未可知。为了了解该家族中每个AtSUS成员的确切功能,开展了蛋白质结构的比较研究,并运用实时定量逆转录-聚合酶链反应技术对整个基因家族进行表达谱分析。在包括发育中和萌发中的种子在内的多个植物器官中分析了转录水平。随后进行了一系列处理,如缺氧、脱水、冷处理或各种糖分饲喂,以进一步表征该家族成员。AtSUS基因呈现出不同但部分冗余的表达谱。例如,在厌氧条件下,AtSUS1和AtSUS4的mRNA水平均升高,但方式不同。AtSUS2在开花后12天的种子中被特异性且高度诱导,是种子成熟的一个标志。AtSUS3似乎在脱水条件下的各种器官中被诱导,包括缺水或遭受渗透胁迫的叶片以及晚熟种子。AtSUS5和AtSUS6在几乎所有植物器官中均有表达,且对胁迫不表现出任何转录响应。这些结果为SUS基因的表达增添了新的见解,并结合AtSUS家族每个成员的不同功能进行了讨论。

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