Rockett John C, Hellmann Gary M
Reproductive Toxicology Division, National Health and Environmental Effects Research Laboratory, United States Environmental Protection Agency, Research Triangle Park, NC 27711, USA.
Genomics. 2004 Apr;83(4):541-9. doi: 10.1016/j.ygeno.2003.09.017.
The generation of corroborative data has become a commonly used approach for ensuring the veracity of microarray data. Indeed, the need to conduct corroborative studies has now become official editorial policy for at least 2 journals, and several more are considering introducing such a policy. The issue of corroborating microarray data is a challenging one-there are good arguments for and against conducting such experiments. However, we believe that the introduction of a fixed requirement to corroborate microarray data, especially if adopted by more journals, is overly burdensome and may, in at least several applications of microarray technology, be inappropriate. We also believe that, in cases in which corroborative studies are deemed essential, a lack of clear guidance leaves researchers unclear as to what constitutes an acceptable corroborative study. Guidelines have already been outlined regarding the details of conducting microarray experiments. We propose that all stakeholders, including journal editorial boards, reviewers, and researchers, should undertake concerted and inclusive efforts to address properly and clarify the specific issue of corroborative data. In this article we highlight some of the thorny and vague areas for discussion surrounding this issue. We also report the results of a poll in which 76 life science journals were asked about their current or intended policies on the inclusion of corroborative studies in papers containing microarray data.
生成确证数据已成为确保微阵列数据准确性的常用方法。事实上,进行确证研究的必要性现已成为至少两家期刊的官方编辑政策,还有几家期刊也在考虑引入此类政策。确证微阵列数据这一问题颇具挑战性——对于是否开展此类实验存在正反两方面的充分理由。然而,我们认为对确证微阵列数据设定固定要求,尤其是若更多期刊采用这一要求,会过于繁重,并且在微阵列技术的至少若干应用中可能并不合适。我们还认为,在确证研究被视为必不可少的情况下,缺乏明确的指导会让研究人员不清楚什么样的确证研究才是可接受的。关于进行微阵列实验的细节已经有了相关指南。我们建议所有利益相关者,包括期刊编辑委员会、审稿人和研究人员,应共同做出全面努力,妥善处理并阐明确证数据这一具体问题。在本文中,我们突出了围绕该问题一些棘手且模糊的讨论领域。我们还报告了一项调查结果,在该调查中,我们询问了76种生命科学期刊关于它们在包含微阵列数据的论文中纳入确证研究的当前或预期政策。