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利用基因组学进行清理:将分子生物学应用于生物修复。

Cleaning up with genomics: applying molecular biology to bioremediation.

作者信息

Lovley Derek R

机构信息

Department of Microbiology, University of Massachusetts, Amherst, Massachusetts 01003, USA.

出版信息

Nat Rev Microbiol. 2003 Oct;1(1):35-44. doi: 10.1038/nrmicro731.

Abstract

Bioremediation has the potential to restore contaminated environments inexpensively yet effectively, but a lack of information about the factors controlling the growth and metabolism of microorganisms in polluted environments often limits its implementation. However, rapid advances in the understanding of bioremediation are on the horizon. Researchers now have the ability to culture microorganisms that are important in bioremediation and can evaluate their physiology using a combination of genome-enabled experimental and modelling techniques. In addition, new environmental genomic techniques offer the possibility for similar studies on as-yet-uncultured organisms. Combining models that can predict the activity of microorganisms that are involved in bioremediation with existing geochemical and hydrological models should transform bioremediation from a largely empirical practice into a science.

摘要

生物修复有潜力以低成本且高效地恢复受污染的环境,但缺乏关于污染环境中控制微生物生长和代谢因素的信息常常限制了其实施。然而,生物修复领域的理解正在迅速取得进展。研究人员现在有能力培养在生物修复中重要的微生物,并能使用基于基因组的实验和建模技术相结合的方法来评估它们的生理特性。此外,新的环境基因组技术为对尚未培养的生物进行类似研究提供了可能性。将能够预测参与生物修复的微生物活性的模型与现有的地球化学和水文模型相结合,应该会将生物修复从一种主要基于经验的实践转变为一门科学。

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