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嗜铀地杆菌细胞色素对铀生物修复的新见解。

New insights in uranium bioremediation by cytochromes of the bacterium Geotalea uraniireducens.

作者信息

Almeida Alexandre, Turner David L, Silva Marta A, Salgueiro Carlos A

机构信息

Associate Laboratory i4HB - Institute for Health and Bioeconomy, NOVA School of Science and Technology, Universidade NOVA de Lisboa, Caparica, Portugal; UCIBIO - Applied Molecular Biosciences Unit, Chemistry Department, NOVA School of Science and Technology, Universidade NOVA de Lisboa, Caparica, Portugal.

Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa, Oeiras, Portugal.

出版信息

J Biol Chem. 2025 Feb;301(2):108090. doi: 10.1016/j.jbc.2024.108090. Epub 2024 Dec 14.

Abstract

The bacterium Geotalea uraniireducens, commonly found in uranium-contaminated environments, plays a key role in bioremediation strategies by converting the soluble hexavalent form of uranium (U(VI)) into less soluble forms (e.g., U(IV)). While most of the reduction and concomitant precipitation of uranium occur outside the cells, there have been reports of important reduction processes taking place in the periplasm. In any case, the triheme periplasmic cytochromes are key players, either by ensuring an effective interface between the cell's interior and exterior or by directly participating in the reduction of the metal. Therefore, understanding the functional mechanism of the highly abundant triheme cytochromes in G. uraniireducens' is crucial for elucidating the respiratory pathways in this bacterium. In this work, a detailed functional characterization of the triheme cytochromes PpcA and PpcB from G. uraniireducens was conducted using NMR and visible spectroscopy techniques. Despite sharing high amino acid sequence identity and structural homology with their counterparts from Geobacter sulfurreducens, the results showed that the heme reduction potential values are less negative, the order of oxidation of the hemes is distinct, and the redox and redox-Bohr network of interactions revealed unprecedented functional mechanisms in the cytochromes of G. uraniireducens. In these cytochromes, the reduction potential values of the three heme groups are much more similar, resulting in a narrower range of values, that facilitates directional electron flow from the inner membrane, thereby optimizing the uranium reduction.

摘要

铀还原地杆菌通常存在于受铀污染的环境中,通过将可溶的六价铀(U(VI))转化为难溶形式(如U(IV)),在生物修复策略中发挥关键作用。虽然大部分铀的还原和伴随的沉淀发生在细胞外,但也有报道称在周质中发生了重要的还原过程。无论如何,三血红素周质细胞色素都是关键参与者,要么通过确保细胞内部和外部之间的有效界面,要么通过直接参与金属的还原。因此,了解铀还原地杆菌中高度丰富的三血红素细胞色素的功能机制对于阐明该细菌的呼吸途径至关重要。在这项工作中,使用核磁共振和可见光谱技术对铀还原地杆菌的三血红素细胞色素PpcA和PpcB进行了详细的功能表征。尽管它们与硫还原地杆菌的对应物具有高度的氨基酸序列同一性和结构同源性,但结果表明,血红素还原电位值的负值较小,血红素的氧化顺序不同,并且氧化还原和氧化还原-玻尔相互作用网络揭示了铀还原地杆菌细胞色素中前所未有的功能机制。在这些细胞色素中,三个血红素基团的还原电位值更加相似,导致值的范围更窄,这有利于从内膜进行定向电子流动,从而优化铀的还原。

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