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1
ESTGenes: alternative splicing from ESTs in Ensembl.
Genome Res. 2004 May;14(5):976-87. doi: 10.1101/gr.1862204.
2
The Ensembl automatic gene annotation system.
Genome Res. 2004 May;14(5):942-50. doi: 10.1101/gr.1858004.
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The draft genome sequence of the nematode Caenorhabditis briggsae, a companion to C. elegans.
Genome Biol. 2003;4(12):238. doi: 10.1186/gb-2003-4-12-238. Epub 2003 Nov 18.
6
nGASP--the nematode genome annotation assessment project.
BMC Bioinformatics. 2008 Dec 19;9:549. doi: 10.1186/1471-2105-9-549.
7
Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome.
BMC Bioinformatics. 2006 Dec 18;7 Suppl 5(Suppl 5):S2. doi: 10.1186/1471-2105-7-S5-S2.
8
prot4EST: translating expressed sequence tags from neglected genomes.
BMC Bioinformatics. 2004 Nov 30;5:187. doi: 10.1186/1471-2105-5-187.
9
Characterising alternate splicing and tissue specific expression in the chicken from ESTs.
Cytogenet Genome Res. 2007;117(1-4):268-77. doi: 10.1159/000103188.
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Nanopore microscope identifies RNA isoforms with structural colours.
Nat Chem. 2022 Nov;14(11):1258-1264. doi: 10.1038/s41557-022-01037-5. Epub 2022 Sep 19.
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Temporal dynamics in meta longitudinal RNA-Seq data.
Sci Rep. 2019 Jan 24;9(1):763. doi: 10.1038/s41598-018-37397-7.
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The common marmoset genome provides insight into primate biology and evolution.
Nat Genet. 2014 Aug;46(8):850-7. doi: 10.1038/ng.3042. Epub 2014 Jul 20.
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SpliceVista, a tool for splice variant identification and visualization in shotgun proteomics data.
Mol Cell Proteomics. 2014 Jun;13(6):1552-62. doi: 10.1074/mcp.M113.031203. Epub 2014 Apr 1.
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Modeling alternative splicing variants from RNA-Seq data with isoform graphs.
J Comput Biol. 2014 Jan;21(1):16-40. doi: 10.1089/cmb.2013.0112. Epub 2013 Nov 7.
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A single-molecule long-read survey of the human transcriptome.
Nat Biotechnol. 2013 Nov;31(11):1009-14. doi: 10.1038/nbt.2705. Epub 2013 Oct 13.
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Generation and analysis of the expressed sequence tags from the mycelium of Ganoderma lucidum.
PLoS One. 2013 May 2;8(5):e61127. doi: 10.1371/journal.pone.0061127. Print 2013.

本文引用的文献

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The Ensembl automatic gene annotation system.
Genome Res. 2004 May;14(5):942-50. doi: 10.1101/gr.1858004.
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Genome sequence of the Brown Norway rat yields insights into mammalian evolution.
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The DNA sequence and analysis of human chromosome 6.
Nature. 2003 Oct 23;425(6960):805-11. doi: 10.1038/nature02055.
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Mechanisms of alternative pre-messenger RNA splicing.
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Human-mouse alignments with BLASTZ.
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The DNA sequence and analysis of human chromosome 14.
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The DNA sequence and comparative analysis of human chromosome 20.
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