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RECON：一种用于预测核小体形成潜力的程序。

RECON: a program for prediction of nucleosome formation potential.

作者信息

Levitsky Victor G

机构信息

Novosibirsk State University, Pirogova 2, Novosibirsk, 630090, Russia.

出版信息

Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W346-9. doi: 10.1093/nar/gkh482.

DOI:10.1093/nar/gkh482
PMID:15215408
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC441620/
Abstract

The program RECON has been designed for constructing profiles of nucleosome potential, characterizing the probability of nucleosome formation along DNA sequences. The program used for recognition of nucleosome formation sites in genomic DNA sequences. It was developed using discriminant analysis based on a genetic algorithm method utilizing statistics for dinucleotide location within local regions of nucleosome formation sites. The program RECON is available at http://wwwmgs.bionet.nsc.ru/mgs/programs/recon/.

摘要

RECON程序旨在构建核小体电位图谱，表征沿DNA序列形成核小体的概率。该程序用于识别基因组DNA序列中的核小体形成位点。它是基于遗传算法方法的判别分析开发的，利用了核小体形成位点局部区域内二核苷酸位置的统计数据。RECON程序可在http://wwwmgs.bionet.nsc.ru/mgs/programs/recon/获取。

相似文献

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Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W346-9. doi: 10.1093/nar/gkh482.
2
[Statistical analysis of nucleosome formation sites].[核小体形成位点的统计分析]
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Changes in chromatin accessibility across the GM-CSF promoter upon T cell activation are dependent on nuclear factor kappaB proteins.T细胞活化后，GM-CSF启动子区域染色质可及性的变化依赖于核因子κB蛋白。
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Bioinformatics. 2001 Nov;17(11):1062-4. doi: 10.1093/bioinformatics/17.11.1062.
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Nucleosome formation potential of eukaryotic DNA: calculation and promoters analysis.真核生物DNA的核小体形成潜力：计算与启动子分析
Bioinformatics. 2001 Nov;17(11):998-1010. doi: 10.1093/bioinformatics/17.11.998.
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