• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

由于引物结合区域的突变,STR系统ACTBP2(SE33)中出现等位基因脱扣现象。

Allelic drop-out in the STR system ACTBP2 (SE33) as a result of mutations in the primer binding region.

作者信息

Heinrich Marielle, Müller Miriam, Rand Steven, Brinkmann Bernd, Hohoff Carsten

机构信息

Institut für Rechtsmedizin, Universitätsklinikum Münster, Röntgenstrasse 23, 48149 Münster, Germany.

出版信息

Int J Legal Med. 2004 Dec;118(6):361-3. doi: 10.1007/s00414-004-0473-0. Epub 2004 Aug 20.

DOI:10.1007/s00414-004-0473-0
PMID:15322828
Abstract

In the course of routine genotyping of forensic reference samples by multiplex PCR, an allelic drop-out due to mutations in the primer binding regions of the highly polymorphic STR marker ACTBP2 was observed in 17 samples. The variation rate was estimated to be 0.0014 (95% confidence interval: 0.0006-0.003). The most frequently found mutation was an G to A transition in the reverse primer binding region which was present in 14 out of 17 cases. To overcome the problem we have added a modified reverse primer to different multiplex kits that led to the correct genotype.

摘要

在通过多重PCR对法医参考样本进行常规基因分型的过程中,在17个样本中观察到由于高度多态性STR标记ACTBP2的引物结合区域发生突变而导致的等位基因脱失。变异率估计为0.0014(95%置信区间:0.0006 - 0.003)。最常发现的突变是反向引物结合区域中从G到A的转换,在17例中有14例出现。为克服该问题,我们已在不同的多重试剂盒中添加了改良的反向引物,从而得到正确的基因型。

相似文献

1
Allelic drop-out in the STR system ACTBP2 (SE33) as a result of mutations in the primer binding region.由于引物结合区域的突变,STR系统ACTBP2(SE33)中出现等位基因脱扣现象。
Int J Legal Med. 2004 Dec;118(6):361-3. doi: 10.1007/s00414-004-0473-0. Epub 2004 Aug 20.
2
Variations in primer sequences are the origin of allele drop-out at loci D13S317 and CD4.
Int J Legal Med. 2001;114(4-5):295-7. doi: 10.1007/s004140000183.
3
Identification of a rare mutation in a TH01 primer binding site.
Leg Med (Tokyo). 2007 Nov;9(6):289-92. doi: 10.1016/j.legalmed.2007.04.003. Epub 2007 Jun 11.
4
Detection of a primer-binding site polymorphism for the STR locus D16S539 using the Powerplex 1.1 system and validation of a degenerate primer to correct for the polymorphism.
J Forensic Sci. 2002 Mar;47(2):345-9.
5
Sequence variations in the primer binding regions of the highly polymorphic STR system SE33.
Int J Legal Med. 2002 Dec;116(6):365-7. doi: 10.1007/s00414-002-0306-y. Epub 2002 May 25.
6
A novel type of three band pattern at STR loci.一种新型 STR 基因座三带型。
Forensic Sci Int Genet. 2024 Jul;71:103064. doi: 10.1016/j.fsigen.2024.103064. Epub 2024 May 26.
7
Validation of short tandem repeats (STRs) for forensic usage: performance testing of fluorescent multiplex STR systems and analysis of authentic and simulated forensic samples.用于法医用途的短串联重复序列(STR)验证:荧光多重STR系统的性能测试以及真实和模拟法医样本分析
J Forensic Sci. 2001 May;46(3):647-60.
8
Optimization of STR locus enrichment for STR profiling of fragmented DNA.用于片段化DNA的STR分析的STR基因座富集优化。
Electrophoresis. 2014 Nov;35(21-22):3158-64. doi: 10.1002/elps.201400102. Epub 2014 Oct 1.
9
Concordance and population studies along with stutter and peak height ratio analysis for the PowerPlex ® ESX 17 and ESI 17 Systems.PowerPlex ® ESX 17 和 ESI 17 系统的一致性和群体研究以及口吃和峰值高度比分析。
Forensic Sci Int Genet. 2011 Aug;5(4):269-75. doi: 10.1016/j.fsigen.2010.03.014. Epub 2010 Apr 22.
10
STR typing of archival Bouin's fluid-fixed paraffin-embedded tissue using new sensitive redesigned primers for three STR loci (CSF1P0, D8S1179 and D13S317).使用针对三个短串联重复序列(STR)位点(CSF1P0、D8S1179和D13S317)重新设计的新型灵敏引物,对经布安氏液固定、石蜡包埋的存档组织进行STR分型。
J Forensic Leg Med. 2008 Jan;15(1):27-31. doi: 10.1016/j.jcfm.2006.10.012. Epub 2007 Jan 18.

引用本文的文献

1
Genotype Identification of Complete Hydatidiform Moles without a Maternal Component: Attempts at a Novel 26-plex STR System.无母系成分的完全性葡萄胎的基因型鉴定:新型26重短串联重复序列(STR)系统的尝试
Curr Med Sci. 2025 Jun 23. doi: 10.1007/s11596-025-00071-x.
2
Detecting DNA damage in stored blood samples.检测储存血样中的 DNA 损伤。
Forensic Sci Med Pathol. 2023 Mar;19(1):50-59. doi: 10.1007/s12024-022-00549-3. Epub 2022 Nov 10.
3
An Asymptomatic Case With MEN1 Slipping Through Genetic Screening by SNV-dependent Allelic Dropout.

本文引用的文献

1
Development of the AmpFISTR SEfiler PCR amplification kit: a new multiplex containing the highly discriminating ACTBP2 (SE33) locus.AmpFISTR SEfiler PCR扩增试剂盒的研发:一种包含高鉴别力ACTBP2(SE33)基因座的新型多重试剂盒。
Int J Legal Med. 2004 Aug;118(4):224-34. doi: 10.1007/s00414-004-0459-y. Epub 2004 May 15.
2
Primer binding site mutations affecting the typing of STR loci contained within the AMPFlSTR SGM Plus kit.影响AMPFlSTR SGM Plus试剂盒中所含STR基因座分型的引物结合位点突变。
Forensic Sci Int. 2004 Jan 28;139(2-3):255-9. doi: 10.1016/j.forsciint.2003.10.004.
3
Validation of the multiplex kit genRESMPX-2 for forensic casework analysis.
一例通过单核苷酸变异依赖性等位基因脱失在基因筛查中漏检的MEN1无症状病例。
J Endocr Soc. 2022 Jul 31;6(9):bvac118. doi: 10.1210/jendso/bvac118. eCollection 2022 Sep 1.
4
Development and validation of a novel 26-plex system for prenatal diagnosis with forensic markers.一种用于产前诊断的含法医标记物的新型26重检测系统的开发与验证
Int J Legal Med. 2022 Mar;136(2):527-537. doi: 10.1007/s00414-022-02780-7. Epub 2022 Jan 31.
5
Elevated germline mutation rate in teenage fathers.青少年父亲的生殖系突变率升高。
Proc Biol Sci. 2015 Mar 22;282(1803):20142898. doi: 10.1098/rspb.2014.2898.
6
Familial identification: population structure and relationship distinguishability.家族鉴定:群体结构与个体关系辨识度。
PLoS Genet. 2012 Feb;8(2):e1002469. doi: 10.1371/journal.pgen.1002469. Epub 2012 Feb 9.
7
Haplotype-assisted characterization of germline mutations at short tandem repeat loci.基于单体型的短串联重复序列位点种系突变特征分析。
Int J Legal Med. 2010 May;124(3):177-82. doi: 10.1007/s00414-009-0377-0. Epub 2009 Nov 11.
8
Characterization of two unusual allele variants at the STR locus ACTBP2 (SE33).
Forensic Sci Med Pathol. 2008;4(3):164-6. doi: 10.1007/s12024-007-9021-9. Epub 2008 Jan 5.
9
Meiosis study in a population sample from Nigeria: allele frequencies and mutation rates of 16 STR loci.尼日利亚人群样本中的减数分裂研究:16个短串联重复序列(STR)位点的等位基因频率和突变率
Int J Legal Med. 2009 May;123(3):259-61. doi: 10.1007/s00414-008-0307-6. Epub 2009 Jan 21.
10
Identification and sequence analysis of discordant phenotypes between AmpFlSTR SGM Plus and PowerPlex 16.AmpFlSTR SGM Plus与PowerPlex 16之间不一致表型的鉴定及序列分析。
Int J Legal Med. 2007 Jul;121(4):297-301. doi: 10.1007/s00414-007-0167-5. Epub 2007 Apr 4.
用于法医案件分析的多重试剂盒genRESMPX - 2的验证。
Int J Legal Med. 2003 Dec;117(6):317-25. doi: 10.1007/s00414-003-0385-4. Epub 2003 Oct 10.
4
Identification of a D8S1179 primer binding site mutation and the validation of a primer designed to recover null alleles.D8S1179引物结合位点突变的鉴定及用于恢复无效等位基因的引物的验证。
Forensic Sci Int. 2003 May 5;133(3):220-7. doi: 10.1016/s0379-0738(03)00035-5.
5
Sequence variations in the primer binding regions of the highly polymorphic STR system SE33.
Int J Legal Med. 2002 Dec;116(6):365-7. doi: 10.1007/s00414-002-0306-y. Epub 2002 May 25.
6
Allele frequency data for 16 STR loci in the Vietnamese population.越南人群中16个短串联重复序列(STR)基因座的等位基因频率数据。
Int J Legal Med. 2002 Aug;116(4):246-8. doi: 10.1007/s00414-002-0313-z.
7
Kurdish population data for 11 STR loci (ACTBP2, CSF1PO, FGA, TH01, TPOX, vWA, D3S1358, D5S818, D7S820, D13S317 and D21S11).11个短串联重复序列基因座(ACTBP2、CSF1PO、FGA、TH01、TPOX、vWA、D3S1358、D5S818、D7S820、D13S317和D21S11)的库尔德人群数据。
Int J Legal Med. 2002 Oct;116(5):301-3. doi: 10.1007/s00414-002-0294-y. Epub 2002 May 28.
8
Frequency data for the STR locus ACTBP2 (SE33) in eight populations.
Int J Legal Med. 2001 Oct;115(2):94-6. doi: 10.1007/s004140100209.
9
Non-amplification of an allele of the D8S1179 locus due to a point mutation.
Int J Legal Med. 2001 Aug;115(1):45-7. doi: 10.1007/s004140100213.
10
Variations in primer sequences are the origin of allele drop-out at loci D13S317 and CD4.
Int J Legal Med. 2001;114(4-5):295-7. doi: 10.1007/s004140000183.