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全基因组RNA干扰作为果蝇基因功能研究的一条途径。

Genome-wide RNAi as a route to gene function in Drosophila.

作者信息

Kuttenkeuler David, Boutros Michael

机构信息

Boveri-Group Signaling and Functional Genomics, German Cancer Research Center, Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.

出版信息

Brief Funct Genomic Proteomic. 2004 Aug;3(2):168-76. doi: 10.1093/bfgp/3.2.168.

Abstract

With the sequencing of the human genome and the genomes of most major model organisms completed, the systematic characterisation of gene functions remains a key challenge. During the past few years, RNA interference (RNAi) has become a powerful tool to silence the expression of genes and analyse their loss-of-function phenotype when mutant alleles are not available. Genome-wide RNAi screens against all predicted genes have been successfully used to dissect a variety of biological processes in Caenorhabditis elegans. Recently, a genome-wide library of double-stranded RNAs, that target every gene in the Drosophila genome and that is suitable for high throughput cell-based assays, was published. In this paper, recent advances will be summarised. Screening strategies and applications as a route to comprehensively characterising gene function will be discussed.

摘要

随着人类基因组以及大多数主要模式生物基因组测序工作的完成,基因功能的系统表征仍然是一项关键挑战。在过去几年中,RNA干扰(RNAi)已成为一种强大的工具,可在没有突变等位基因的情况下使基因表达沉默并分析其功能丧失表型。针对所有预测基因的全基因组RNAi筛选已成功用于剖析秀丽隐杆线虫的各种生物学过程。最近,一个针对果蝇基因组中每个基因的双链RNA全基因组文库已发布,该文库适用于基于细胞的高通量分析。本文将总结近期的进展。还将讨论作为全面表征基因功能途径的筛选策略和应用。

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