• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

通过拉曼活性的Fe(2+)-Nε(组氨酸F8)伸缩模式检测到的脱氧血红蛋白鳟鱼IV中Fe(2+)-Nε(组氨酸F8)键合的pH诱导构象变化。

pH-induced conformational changes of the Fe(2+)-N epsilon (His F8) linkage in deoxyhemoglobin trout IV detected by the Raman active Fe(2+)-N epsilon (His F8) stretching mode.

作者信息

Bosenbeck M, Schweitzer-Stenner R, Dreybrodt W

机构信息

Institute of Experimental Physics, University of Bremen, Germany.

出版信息

Biophys J. 1992 Jan;61(1):31-41. doi: 10.1016/S0006-3495(92)81813-1.

DOI:10.1016/S0006-3495(92)81813-1
PMID:1540697
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1260220/
Abstract

To investigate heme-protein coupling via the Fe(2+)-N epsilon (His F8) linkage we have measured the profile of the Raman band due to the Fe(2+)-N epsilon (His F8) stretching mode (nu Fe-His) of deoxyHb-trout IV and deoxyHbA at various pH between 6.0 and 9.0. Our data establish that the band of this mode is composed of five different sublines. In deoxyHb-trout IV, three of these sublines were assigned to distinct conformations of the alpha-subunit (omega alpha 1 = 202 cm-1, omega alpha 2 = 211 cm-1, omega alpha 3 = 217 cm-1) and the other two to distinct conformations of the beta-subunit (omega beta 1 = 223 cm-1 and omega beta 2 = 228 cm-1). Human deoxyHbA exhibits two alpha-chain sublines at omega alpha 1 = 203 cm-1, omega alpha 2 = 212 cm-1 and two beta-chain sublines at omega beta 1 = 217 cm-1 and omega beta 2 = 225 cm-1. These results reveal that each subunit exists in different conformations. The intensities of the nu Fe-His sublines in deoxyHb-trout IV exhibit a significant pH dependence, whereas the intensities of the corresponding sublines in the deoxyHbA spectrum are independent on pH. This finding suggests that the structural basis of the Bohr effect is different in deoxyHbA and deoxyHb-trout IV. To analyse the pH dependence of the deoxyHb-trout IV sublines we have applied a titration model describing the intensity of each nu Fe-His subline as an incoherent superposition of the intensities from sub-sublines with the same frequency but differing intrinsic intensities due to the different protonation states of the respective subunit. The molar fractions of these protonation states are determined by the corresponding Bohr groups (i.e., pK alpha 1 = pK alpha 2 = 8.5, pK beta 1 = 7.5, pK beta 2 = 7.4) and pH. Hence, the intensities of these sublines reflect the pH dependence of the molar fractions of the involved protonation states. Fitting this model to the pH-dependent line intensities yields a good reproduction of the experimental data. To elucidate the structural basis of the observed results we have employed models proposed by Bangchoroenpaurpong, O., K. T. Schomaker, and P. M. Champion. (1984. J. Am. Chem. Soc. 106:5688-5698) and Friedman, J. M., B. F. Campbell, and R. W. Noble. (1990. Biophys. Chem. 37:43-59) which describe the coupling between the sigma *orbitals of the Fe2+-NJ(His F8) bond and the phi * orbitals of the pyrrole nitrogens in terms of the tilt angle theta between its Fe2+-N,(HisF8)-bond and the heme normal and the azimuthal angle phi between the Fe2+-N.(His F8) projection on the heme and the N1-N3 axis.Our results indicate that each subconformation reflected by different frequencies of the VFe His-subline is related to different tilt angles theta, whereas the pH-induced intensity variations of each VFe His subline of the deoxy Hb trout IV spectrum are caused by changes of the azimuthal angle phi.

摘要

为了通过Fe(2+)-Nε(His F8)键研究血红素-蛋白质偶联,我们测量了在6.0至9.0的不同pH值下,脱氧血红蛋白-鳟鱼IV和脱氧血红蛋白A中由于Fe(2+)-Nε(His F8)伸缩模式(νFe-His)引起的拉曼带轮廓。我们的数据表明,该模式的带由五个不同的子线组成。在脱氧血红蛋白-鳟鱼IV中,其中三个子线被指定为α亚基的不同构象(ωα1 = 202 cm-1,ωα2 = 211 cm-1,ωα3 = 217 cm-1),另外两个被指定为β亚基的不同构象(ωβ1 = 223 cm-1和ωβ2 = 228 cm-1)。人脱氧血红蛋白A在ωα1 = 203 cm-1、ωα2 = 212 cm-1处表现出两条α链子线,在ωβ1 = 217 cm-1和ωβ2 = 225 cm-1处表现出两条β链子线。这些结果表明每个亚基以不同的构象存在。脱氧血红蛋白-鳟鱼IV中νFe-His子线的强度表现出显著的pH依赖性,而脱氧血红蛋白A光谱中相应子线的强度与pH无关。这一发现表明,脱氧血红蛋白A和脱氧血红蛋白-鳟鱼IV中玻尔效应的结构基础不同。为了分析脱氧血红蛋白-鳟鱼IV子线的pH依赖性,我们应用了一个滴定模型,将每个νFe-His子线的强度描述为来自具有相同频率但由于各自亚基不同质子化状态而具有不同固有强度的子子线强度的非相干叠加。这些质子化状态的摩尔分数由相应的玻尔基团(即pKα1 = pKα2 = 8.5,pKβ1 = 7.5,pKβ2 = 7.4)和pH决定。因此,这些子线的强度反映了所涉及质子化状态摩尔分数的pH依赖性。将该模型拟合到pH依赖性线强度上,能够很好地重现实验数据。为了阐明观察结果的结构基础,我们采用了Bangchoroenpaurpong、O.、K. T. Schomaker和P. M. Champion(1984年,《美国化学会志》106:5688 - 5698)以及Friedman、J. M.、B. F. Campbell和R. W. Noble(1990年,《生物物理化学》37:43 - 59)提出的模型,这些模型根据其Fe2+-N,(HisF8)-键与血红素法线之间的倾斜角θ以及Fe2+-N.(His F8)在血红素上的投影与N1 - N3轴之间的方位角φ来描述Fe2+-NJ(His F8)键的σ轨道与吡咯氮的φ轨道之间的耦合。我们的结果表明,由VFe His子线的不同频率反映的每个亚构象与不同的倾斜角θ相关,而脱氧血红蛋白-鳟鱼IV光谱中每个VFe His子线的pH诱导强度变化是由方位角φ的变化引起的。

相似文献

1
pH-induced conformational changes of the Fe(2+)-N epsilon (His F8) linkage in deoxyhemoglobin trout IV detected by the Raman active Fe(2+)-N epsilon (His F8) stretching mode.通过拉曼活性的Fe(2+)-Nε(组氨酸F8)伸缩模式检测到的脱氧血红蛋白鳟鱼IV中Fe(2+)-Nε(组氨酸F8)键合的pH诱导构象变化。
Biophys J. 1992 Jan;61(1):31-41. doi: 10.1016/S0006-3495(92)81813-1.
2
Structural heterogeneity of the Fe(2+)-N epsilon (HisF8) bond in various hemoglobin and myoglobin derivatives probed by the Raman-active iron histidine stretching mode.通过拉曼活性铁-组氨酸伸缩模式探测的各种血红蛋白和肌红蛋白衍生物中Fe(2+)-Nε(HisF8)键的结构异质性
Biophys J. 1993 Oct;65(4):1470-85. doi: 10.1016/S0006-3495(93)81216-5.
3
Thermal fluctuations between conformational substates of the Fe(2+)-HisF8 linkage in deoxymyoglobin probed by the Raman active Fe-N epsilon (HisF8) stretching vibration.通过拉曼活性的铁-氮ε(组氨酸F8)伸缩振动探测脱氧肌红蛋白中Fe(2+)-组氨酸F8连接构象亚态之间的热涨落。
Biophys J. 1995 Jul;69(1):214-27. doi: 10.1016/S0006-3495(95)79893-9.
4
Raman dispersion spectroscopy probes heme distortions in deoxyHb-trout IV involved in its T-state Bohr effect.喇曼光谱分散技术探测脱氧 Hb-鳟鱼 IV 中的亚铁血红素构象变化,这与它 T 态的波尔效应有关。
Biophys J. 1993 Apr;64(4):1194-209. doi: 10.1016/S0006-3495(93)81485-1.
5
Structure changes in hemoglobin upon deletion of C-terminal residues, monitored by resonance Raman spectroscopy.通过共振拉曼光谱监测,血红蛋白在C末端残基缺失时的结构变化。
Biochemistry. 1998 Jul 14;37(28):9940-51. doi: 10.1021/bi980295h.
6
Differences in Fe(II)-N epsilon(His-F8) stretching frequencies between deoxyhemoglobins in the two alternative quaternary structures.两种不同四级结构的脱氧血红蛋白之间Fe(II)-Nε(组氨酸-F8)伸缩频率的差异。
Proc Natl Acad Sci U S A. 1980 Apr;77(4):2033-7. doi: 10.1073/pnas.77.4.2033.
7
Functional implications of the proximal hydrogen-bonding network in myoglobin: a resonance Raman and kinetic study of Leu89, Ser92, His97, and F-helix swap mutants.肌红蛋白中近端氢键网络的功能影响:对Leu89、Ser92、His97和F-螺旋交换突变体的共振拉曼光谱和动力学研究
Biochemistry. 1998 Sep 1;37(35):12301-19. doi: 10.1021/bi980752u.
8
Detection of the heme perturbations caused by the quaternary R----T transition in oxyhemoglobin trout IV by resonance Raman scattering.通过共振拉曼散射检测鳟鱼血红蛋白IV中氧合血红蛋白四级结构从R态到T态转变引起的血红素扰动。
Biophys J. 1989 Apr;55(4):703-12. doi: 10.1016/S0006-3495(89)82869-3.
9
Heme structure of hemoglobin M Iwate [alpha 87(F8)His-->Tyr]: a UV and visible resonance Raman study.血红蛋白M岩手型[α87(F8)组氨酸→酪氨酸]的血红素结构:紫外和可见共振拉曼光谱研究
Biochemistry. 2000 Oct 31;39(43):13093-105. doi: 10.1021/bi001029i.
10
UV resonance Raman studies of alpha-nitrosyl hemoglobin derivatives: relation between the alpha 1-beta 2 subunit interface interactions and the Fe-histidine bonding of alpha heme.α-亚硝基血红蛋白衍生物的紫外共振拉曼光谱研究:α1-β2亚基界面相互作用与α-血红素铁-组氨酸键合之间的关系
Biochemistry. 1999 Jul 27;38(30):9659-66. doi: 10.1021/bi990567w.

引用本文的文献

1
Nuclear resonance vibrational spectra of five-coordinate imidazole-ligated iron(II) porphyrinates.五配位咪唑配体铁(II)卟啉的核共振振动光谱。
Inorg Chem. 2012 Feb 6;51(3):1359-70. doi: 10.1021/ic201580v. Epub 2012 Jan 13.
2
Raman dispersion spectroscopy probes heme distortions in deoxyHb-trout IV involved in its T-state Bohr effect.喇曼光谱分散技术探测脱氧 Hb-鳟鱼 IV 中的亚铁血红素构象变化,这与它 T 态的波尔效应有关。
Biophys J. 1993 Apr;64(4):1194-209. doi: 10.1016/S0006-3495(93)81485-1.
3
The Fe(2+)-His(F8) Raman band shape of deoxymyoglobin reveals taxonomic conformational substates of the proximal linkage.脱氧肌红蛋白的Fe(2+)-His(F8)拉曼带形状揭示了近端连接的分类学构象亚态。
Biophys J. 2001 Sep;81(3):1624-31. doi: 10.1016/S0006-3495(01)75816-X.
4
Iron-histidine resonance Raman band of deoxyheme proteins: effects of anharmonic coupling and glass-liquid phase transition.脱氧血红素蛋白的铁-组氨酸共振拉曼带:非谐耦合和玻璃-液相相变的影响。
Biophys J. 1999 Nov;77(5):2764-76. doi: 10.1016/S0006-3495(99)77109-2.
5
Dynamic properties of monomeric insect erythrocruorin III from Chironomus thummi-thummi: relationships between structural flexibility and functional complexity.来自摇蚊(Chironomus thummi-thummi)的单体昆虫血红细胞生成素III的动态特性:结构灵活性与功能复杂性之间的关系。
Biophys J. 1997 Nov;73(5):2742-51. doi: 10.1016/S0006-3495(97)78303-6.
6
The effect of iron displacement out of the porphyrin plane on the resonance Raman spectra of heme proteins and iron porphyrins.铁从卟啉平面移出对血红素蛋白和铁卟啉共振拉曼光谱的影响。
Biophys J. 1993 Nov;65(5):1942-50. doi: 10.1016/S0006-3495(93)81265-7.
7
Structural heterogeneity of the Fe(2+)-N epsilon (HisF8) bond in various hemoglobin and myoglobin derivatives probed by the Raman-active iron histidine stretching mode.通过拉曼活性铁-组氨酸伸缩模式探测的各种血红蛋白和肌红蛋白衍生物中Fe(2+)-Nε(HisF8)键的结构异质性
Biophys J. 1993 Oct;65(4):1470-85. doi: 10.1016/S0006-3495(93)81216-5.
8
Thermal fluctuations between conformational substates of the Fe(2+)-HisF8 linkage in deoxymyoglobin probed by the Raman active Fe-N epsilon (HisF8) stretching vibration.通过拉曼活性的铁-氮ε(组氨酸F8)伸缩振动探测脱氧肌红蛋白中Fe(2+)-组氨酸F8连接构象亚态之间的热涨落。
Biophys J. 1995 Jul;69(1):214-27. doi: 10.1016/S0006-3495(95)79893-9.

本文引用的文献

1
Carp hemoglobin. I. Precise oxygen equilibrium and analysis according to the models of Adair and of Monod, Wyman, and Changeux.鲤鱼血红蛋白。I. 根据阿代尔模型以及莫诺、怀曼和尚热模型进行的精确氧平衡与分析。
J Biol Chem. 1980 Oct 25;255(20):9790-9.
2
Quaternary structures and low frequency molecular vibrations of haems of deoxy and oxyhaemoglobin studied by resonance raman scattering.通过共振拉曼散射研究脱氧血红蛋白和氧合血红蛋白血红素的四级结构及低频分子振动。
J Mol Biol. 1980 Jan 25;136(3):271-89. doi: 10.1016/0022-2836(80)90374-5.
3
Stereochemistry of cooperative effects in fish an amphibian haemoglobins.鱼类和两栖类血红蛋白协同效应的立体化学
Nature. 1982 Sep 30;299(5882):421-6. doi: 10.1038/299421a0.
4
Quaternary structure changes in iron-cobalt hybrid hemoglobins detected by resonance Raman scattering.通过共振拉曼散射检测铁钴杂合血红蛋白的四级结构变化。
J Biol Chem. 1982 Aug 10;257(15):8766-70.
5
Dynamic protein structures: infrared evidence for four discrete rapidly interconverting conformers at the carbon monoxide binding site of bovine heart myoglobin.动态蛋白质结构:牛心肌红蛋白一氧化碳结合位点处四个离散的快速相互转化构象体的红外证据。
Proc Natl Acad Sci U S A. 1981 May;78(5):2903-7. doi: 10.1073/pnas.78.5.2903.
6
Differences in Fe(II)-N epsilon(His-F8) stretching frequencies between deoxyhemoglobins in the two alternative quaternary structures.两种不同四级结构的脱氧血红蛋白之间Fe(II)-Nε(组氨酸-F8)伸缩频率的差异。
Proc Natl Acad Sci U S A. 1980 Apr;77(4):2033-7. doi: 10.1073/pnas.77.4.2033.
7
The iron-proximal histidine linkage and protein control of oxygen binding in hemoglobin. A transient Raman study.血红蛋白中氧结合的铁-近端组氨酸连接与蛋白质调控:一项瞬态拉曼研究
J Biol Chem. 1983 Sep 10;258(17):10564-72.
8
Structure of human oxyhaemoglobin at 2.1 A resolution.人氧合血红蛋白在2.1埃分辨率下的结构。
J Mol Biol. 1983 Nov 25;171(1):31-59. doi: 10.1016/s0022-2836(83)80313-1.
9
Stereochemistry of cooperative effects in haemoglobin.血红蛋白协同效应的立体化学
Nature. 1970 Nov 21;228(5273):726-39. doi: 10.1038/228726a0.
10
The effect of pH on the reactions of oxygen and carbon monoxide with the hemoglobin of the carp, Cyprinus carpio.pH对氧气和一氧化碳与鲤鱼(Cyprinus carpio)血红蛋白反应的影响。
J Biol Chem. 1970 Dec 25;245(24):6628-33.