Galle Jörg, Loeffler Markus, Drasdo Dirk
Interdisciplinary Centre for Bioinformatics, Leipzig, Germany.
Biophys J. 2005 Jan;88(1):62-75. doi: 10.1529/biophysj.104.041459. Epub 2004 Oct 8.
We present a three-dimensional individual cell-based, biophysical model to study the effect of normal and malfunctioning growth regulation and control on the spatial-temporal organization of growing cell populations in vitro. The model includes explicit representations of typical epithelial cell growth regulation and control mechanisms, namely 1), a cell-cell contact-mediated form of growth inhibition; 2), a cell-substrate contact-dependent cell-cycle arrest; and 3), a cell-substrate contact-dependent programmed cell death (anoikis). The model cells are characterized by experimentally accessible biomechanical and cell-biological parameters. First, we study by variation of these cell-specific parameters which of them affect the macroscopic morphology and growth kinetics of a cell population within the initial expanding phase. Second, we apply selective knockouts of growth regulation and control mechanisms to investigate how the different mechanisms collectively act together. Thereby our simulation studies cover the growth behavior of epithelial cell populations ranging from undifferentiated stem cell populations via transformed variants up to tumor cell lines in vitro. We find that the cell-specific parameters, and in particular the strength of the cell-substrate anchorage, have a significant impact on the population morphology. Furthermore, they control the efficacy of the growth regulation and control mechanisms, and consequently tune the transition from controlled to uncontrolled growth that is induced by the failures of these mechanisms. Interestingly, however, we find the qualitative and quantitative growth kinetics to be remarkably robust against variations of cell-specific parameters. We compare our simulation results with experimental findings on a number of epithelial and tumor cell populations and suggest in vitro experiments to test our model predictions.
我们提出了一个基于单个细胞的三维生物物理模型,以研究正常和功能失调的生长调节与控制对体外生长细胞群体时空组织的影响。该模型明确表示了典型的上皮细胞生长调节与控制机制,即:1)细胞间接触介导的生长抑制形式;2)细胞与基质接触依赖性的细胞周期停滞;3)细胞与基质接触依赖性的程序性细胞死亡(失巢凋亡)。模型细胞由实验可获取的生物力学和细胞生物学参数表征。首先,我们通过改变这些细胞特异性参数来研究其中哪些参数会影响细胞群体在初始扩展阶段的宏观形态和生长动力学。其次,我们应用生长调节与控制机制的选择性敲除来研究不同机制如何共同作用。由此,我们的模拟研究涵盖了上皮细胞群体的生长行为,范围从未分化的干细胞群体、转化变体到体外肿瘤细胞系。我们发现细胞特异性参数,特别是细胞与基质的锚定强度,对群体形态有显著影响。此外,它们控制着生长调节与控制机制的功效,从而调节由这些机制失效所诱导的从受控生长到失控生长的转变。然而,有趣的是,我们发现定性和定量的生长动力学对细胞特异性参数的变化具有显著的稳健性。我们将模拟结果与多个上皮细胞和肿瘤细胞群体的实验结果进行比较,并提出体外实验以检验我们的模型预测。