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控制欧洲栓皮栎芽萌发和高度生长的数量性状位点的检测

Detection of quantitative trait loci controlling bud burst and height growth in Quercus robur L.

作者信息

Scotti-Saintagne Caroline, Bodénès Catherine, Barreneche Teresa, Bertocchi Evangelista, Plomion Christophe, Kremer Antoine

机构信息

INRA UMR Biodiversité Gènes et Ecosystèmes, 69, Route d'Arcachon, 33612 Cestas Cedex, France.

出版信息

Theor Appl Genet. 2004 Nov;109(8):1648-59. doi: 10.1007/s00122-004-1789-3. Epub 2004 Oct 13.

Abstract

Genetic variation of bud burst and early growth components was estimated in a full-sib family of Quercus robur L. comprising 278 offspring. The full sibs were vegetatively propagated, and phenotypic assessments were made in three field tests. This two-generation pedigree was also used to construct a genetic linkage map (12 linkage groups, 128 markers) and locate quantitative trait loci (QTLs) controlling bud burst and growth components. In each field test, the date of bud burst extended over a period of 20 days from the earliest to the latest clone. Bud burst exhibited higher heritability (0.15-0.51) than growth components (0.04-0.23) and also higher correlations across field tests. Over the three tests there were 32 independent detected QTLs ( P<or=5% at the chromosome level) controlling bud burst, which likely represent at least 12 unique genes or chromosomal regions controlling this trait. QTLs explained from 3% to 11% of the variance of the clonal means. The number of QTLs controlling height growth components was lower and varied between two and four. However the contribution of each QTL to the variance of the clonal mean was higher (from 4% to 19%). These results indicate that the genetic architecture of two important fitness-related traits are quite different. On the one hand, bud burst is controlled by several QTLs with rather low to moderate effects, but contributing to a high genetic (additive) variance. On the other hand, height growth depends on fewer QTLs with moderate to strong effects, resulting in lower heritabilities of the trait.

摘要

在一个包含278个后代的欧洲栓皮栎全同胞家系中,对芽萌发和早期生长成分的遗传变异进行了估计。这些全同胞通过无性繁殖,在三个田间试验中进行了表型评估。这个两代谱系还被用于构建遗传连锁图谱(12个连锁群,128个标记),并定位控制芽萌发和生长成分的数量性状位点(QTL)。在每个田间试验中,从最早到最晚的无性系,芽萌发日期持续了20天。芽萌发表现出比生长成分更高的遗传力(0.15 - 0.51),并且在不同田间试验之间的相关性也更高。在这三个试验中,有32个独立检测到的控制芽萌发的QTL(在染色体水平上P≤5%),这可能代表至少12个控制该性状的独特基因或染色体区域。QTL解释了无性系均值方差的3%至11%。控制高度生长成分的QTL数量较少,在2到4个之间变化。然而,每个QTL对无性系均值方差的贡献更高(从4%到19%)。这些结果表明,两个重要的适合度相关性状的遗传结构有很大差异。一方面,芽萌发由几个效应相当低至中等的QTL控制,但对高遗传(加性)方差有贡献。另一方面,高度生长依赖于较少的效应中等至较强的QTL,导致该性状的遗传力较低。

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