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婆婆纳属植物的基因组大小变异与进化

Genome size variation and evolution in Veronica.

作者信息

Albach Dirk C, Greilhuber J

机构信息

Institute of Botany, University of Vienna, Rennweg 14, 1030 Wien, Austria.

出版信息

Ann Bot. 2004 Dec;94(6):897-911. doi: 10.1093/aob/mch219. Epub 2004 Nov 1.

DOI:10.1093/aob/mch219
PMID:15520022
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC4242286/
Abstract

BACKGROUND AND AIMS

The amount of DNA per chromosome set is known to be a fairly constant characteristic of a species. Its interspecific variation is enormous, but the biological significance of this variation is little understood. Some of the characters believed to be correlated with DNA amount are alpine habitat, life history and breeding system. In the present study, the aim is to distinguish between direct causal connections and chance correlation of the amount of DNA in the genus Veronica.

METHODS

Estimates of DNA amount were analysed for 42 members of Veroniceae in connection with results from a phylogenetic analysis of plastid trnL-F DNA sequences and tested correlations using standard statistical tests, phylogenetically independent contrasts and a model-based generalized least squares method to distinguish the phylogenetic effect on the results.

KEY RESULTS

There appears to be a lower upper limit for DNA amount in annuals than in perennials. Most DNAC-values in Veroniceae are below the mean DNA C-value for annuals in angiosperms as a whole. However, the long-debated correlation of low genome size with annual life history is not significant (P = 0.12) using either standard statistical tests or independent contrasts, but it is significant with the generalized least squares method (P < 0.01).

CONCLUSIONS

The correlation of annual life history and low genome size found in earlier studies could be due to the association of annual life history and selfing, which is significantly correlated with low genome size using any of the three tests applied. This correlation can be explained by models showing a reduction in transposable elements in selfers. A significant correlation of higher genome sizes with alpine habitats was also detected.

摘要

背景与目的

已知每个染色体组的DNA含量是一个物种相当稳定的特征。其种间变异巨大,但这种变异的生物学意义却鲜为人知。一些被认为与DNA含量相关的特征包括高山生境、生活史和繁殖系统。在本研究中,目的是区分婆婆纳属中DNA含量的直接因果关系和偶然相关性。

方法

结合质体trnL-F DNA序列的系统发育分析结果,对婆婆纳科42个成员的DNA含量估计值进行了分析,并使用标准统计检验、系统发育独立对比和基于模型的广义最小二乘法测试相关性,以区分系统发育对结果的影响。

主要结果

一年生植物的DNA含量上限似乎低于多年生植物。婆婆纳科的大多数DNA C值低于整个被子植物一年生植物的平均DNA C值。然而,无论是使用标准统计检验还是独立对比,关于低基因组大小与一年生生活史长期存在争议的相关性都不显著(P = 0.12),但使用广义最小二乘法时具有显著性(P < 0.01)。

结论

早期研究中发现的一年生生活史与低基因组大小的相关性可能是由于一年生生活史与自交的关联,使用所应用的三种测试中的任何一种,自交都与低基因组大小显著相关。这种相关性可以通过显示自交植物中转座元件减少的模型来解释。还检测到较高基因组大小与高山生境之间存在显著相关性。