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一种用于快速鉴定变形链球菌新血清型k菌株的聚合酶链反应(PCR)方法的开发。

Development of a PCR method for rapid identification of new Streptococcus mutans serotype k strains.

作者信息

Nakano Kazuhiko, Nomura Ryota, Shimizu Noriko, Nakagawa Ichiro, Hamada Shigeyuki, Ooshima Takashi

机构信息

Department of Pediatric Dentistry, Osaka University Graduate School of Dentistry, 1-8 Yamada-oka, Suita, Osaka 565-0871, Japan.

出版信息

J Clin Microbiol. 2004 Nov;42(11):4925-30. doi: 10.1128/JCM.42.11.4925-4930.2004.

DOI:10.1128/JCM.42.11.4925-4930.2004
PMID:15528675
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC525190/
Abstract

In a previous study, we isolated and characterized a new serotype k of Streptococcus mutans from human blood and oral cavities. Analysis of the genes involved in biosynthesis of the serotype-specific polysaccharide of serotype k strains revealed that the serotype k-specific nucleotide alignment was commonly present in the 5' region of the rgpF gene (350 bp from the initial sequence) compared to the reference strains, and then a method for rapid identification of serotype k strains was developed by use of PCR with primers designed on the basis of the sequence of the variable region. PCR assays with primers specific for amplification of serotype k strains showed a negative reaction with serotype c, e, and f strains and a positive reaction with serotype k strains, with the sensitivity for identification of the serotype k strains shown to range from 5 to 50 cells. Next, the frequency of positive reactions for serotype k-specific primers was surveyed with DNA taken from saliva samples from 200 subjects (2 to 18 years of age), and 10 of those showed a positive reaction, which was higher than the frequency in our previous survey with a serological method. In addition, all saliva samples from subjects with serotype k strains in our previous study were shown to be positive with the serotype k-specific primers. These results indicate that this new PCR method is effective for identification of subjects with S. mutans serotype k.

摘要

在之前的一项研究中,我们从人血液和口腔中分离并鉴定了一种变形链球菌的新血清型k。对血清型k菌株血清型特异性多糖生物合成相关基因的分析表明,与参考菌株相比,血清型k特异性核苷酸序列通常存在于rgpF基因的5'区域(距起始序列350 bp),然后基于可变区序列设计引物,通过PCR开发了一种快速鉴定血清型k菌株的方法。用特异性扩增血清型k菌株的引物进行PCR检测,结果显示与血清型c、e和f菌株呈阴性反应,与血清型k菌株呈阳性反应,血清型k菌株鉴定的灵敏度为5至50个细胞。接下来,用来自200名受试者(2至18岁)唾液样本的DNA检测血清型k特异性引物的阳性反应频率,其中10人呈阳性反应,高于我们之前用血清学方法进行的调查频率。此外,在我们之前的研究中,所有携带血清型k菌株受试者的唾液样本用血清型k特异性引物检测均呈阳性。这些结果表明,这种新的PCR方法对于鉴定变形链球菌血清型k的受试者是有效的。

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本文引用的文献

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Diagn Microbiol Infect Dis. 2004 Mar;48(3):195-9. doi: 10.1016/j.diagmicrobio.2003.10.002.
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Demonstration of Streptococcus mutans with a cell wall polysaccharide specific to a new serotype, k, in the human oral cavity.在人类口腔中发现具有新血清型k特异性细胞壁多糖的变形链球菌。
J Clin Microbiol. 2004 Jan;42(1):198-202. doi: 10.1128/JCM.42.1.198-202.2004.
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Analysis of loci required for determination of serotype antigenicity in Streptococcus mutans and its clinical utilization.变形链球菌血清型抗原性测定所需位点的分析及其临床应用。
J Clin Microbiol. 2003 Sep;41(9):4107-12. doi: 10.1128/JCM.41.9.4107-4112.2003.
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Identification of mutans streptococci by restriction fragment length polymorphism analysis of polymerase chain reaction-amplified 16S ribosomal RNA genes.通过聚合酶链反应扩增的16S核糖体RNA基因的限制性片段长度多态性分析鉴定变形链球菌。
Oral Microbiol Immunol. 2003 Oct;18(5):323-6. doi: 10.1034/j.1399-302x.2003.00095.x.
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Molecular diagnosis of infective endocarditis by PCR amplification and direct sequencing of DNA from valve tissue.通过对瓣膜组织DNA进行PCR扩增和直接测序对感染性心内膜炎进行分子诊断。
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