相似文献
1
Differences in LexA regulon structure among Proteobacteria through in vivo assisted comparative genomics.
Nucleic Acids Res. 2004 Dec 16;32(22):6617-26. doi: 10.1093/nar/gkh996. Print 2004.
2
A new regulatory DNA motif of the gamma subclass Proteobacteria: identification of the LexA protein binding site of the plant pathogen Xylella fastidiosa.
Microbiology (Reading). 2002 Nov;148(Pt 11):3583-3597. doi: 10.1099/00221287-148-11-3583.
3
An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria.
J Bacteriol. 2015 Aug;197(16):2622-30. doi: 10.1128/JB.00035-15. Epub 2015 May 18.
4
Reconstruction of the evolutionary history of the LexA-binding sequence.
Microbiology (Reading). 2004 Nov;150(Pt 11):3783-3795. doi: 10.1099/mic.0.27315-0.
5
Expression of canonical SOS genes is not under LexA repression in Bdellovibrio bacteriovorus.
J Bacteriol. 2005 Aug;187(15):5367-75. doi: 10.1128/JB.187.15.5367-5375.2005.
6
Genetic makeup of the Corynebacterium glutamicum LexA regulon deduced from comparative transcriptomics and in vitro DNA band shift assays.
Microbiology (Reading). 2009 May;155(Pt 5):1459-1477. doi: 10.1099/mic.0.025841-0. Epub 2009 Apr 16.
7
Identification of the Acidobacterium capsulatum LexA box reveals a lateral acquisition of the Alphaproteobacteria lexA gene.
Microbiology (Reading). 2006 Apr;152(Pt 4):1109-1118. doi: 10.1099/mic.0.28376-0.
8
Conservation of the LexA repressor binding site in Deinococcus radiodurans.
J Integr Bioinform. 2008 Jan 24;5(1):86. doi: 10.2390/biecoll-jib-2008-86.
9
Computational analysis of LexA regulons in Cyanobacteria.
BMC Genomics. 2010 Sep 29;11:527. doi: 10.1186/1471-2164-11-527.
10
Characterization of a new LexA binding motif in the marine magnetotactic bacterium strain MC-1.
J Bacteriol. 2003 Aug;185(15):4471-82. doi: 10.1128/JB.185.15.4471-4482.2003.
引用本文的文献
1
Real-time kinetic studies of Mycobacterium tuberculosis LexA-DNA interaction.
Biosci Rep. 2021 Nov 26;41(11). doi: 10.1042/BSR20211419.
2
Non-canonical LexA proteins regulate the SOS response in the Bacteroidetes.
Nucleic Acids Res. 2021 Nov 8;49(19):11050-11066. doi: 10.1093/nar/gkab773.
3
Integrated Transcriptional Regulatory Network of Quorum Sensing, Replication Control, and SOS Response in .
Front Microbiol. 2019 Apr 12;10:803. doi: 10.3389/fmicb.2019.00803. eCollection 2019.
4
Post-transcriptional gene regulation by an Hfq-independent small RNA in Caulobacter crescentus.
Nucleic Acids Res. 2018 Nov 16;46(20):10969-10982. doi: 10.1093/nar/gky765.
5
The Lon protease-like domain in the bacterial RecA paralog RadA is required for DNA binding and repair.
J Biol Chem. 2017 Jun 9;292(23):9801-9814. doi: 10.1074/jbc.M116.770180. Epub 2017 Apr 21.
6
Assessment of transfer methods for comparative genomics of regulatory networks in bacteria.
BMC Bioinformatics. 2016 Aug 31;17 Suppl 8(Suppl 8):277. doi: 10.1186/s12859-016-1113-7.
7
The Verrucomicrobia LexA-Binding Motif: Insights into the Evolutionary Dynamics of the SOS Response.
Front Mol Biosci. 2016 Jul 20;3:33. doi: 10.3389/fmolb.2016.00033. eCollection 2016.
8
The SOS Response Master Regulator LexA Regulates the Gene Transfer Agent of Rhodobacter capsulatus and Represses Transcription of the Signal Transduction Protein CckA.
J Bacteriol. 2016 Feb 1;198(7):1137-48. doi: 10.1128/JB.00839-15.
9
An SOS Regulon under Control of a Noncanonical LexA-Binding Motif in the Betaproteobacteria.
J Bacteriol. 2015 Aug;197(16):2622-30. doi: 10.1128/JB.00035-15. Epub 2015 May 18.
10
Signal correlations in ecological niches can shape the organization and evolution of bacterial gene regulatory networks.
Adv Microb Physiol. 2012;61:1-36. doi: 10.1016/B978-0-12-394423-8.00001-9.
本文引用的文献
1
Widespread distribution of a lexA-regulated DNA damage-inducible multiple gene cassette in the Proteobacteria phylum.
Mol Microbiol. 2004 Oct;54(1):212-22. doi: 10.1111/j.1365-2958.2004.04260.x.
2
Critical role of magnesium ions in DNA polymerase beta's closing and active site assembly.
J Am Chem Soc. 2004 Jul 14;126(27):8441-53. doi: 10.1021/ja049412o.
3
PredictRegulon: a web server for the prediction of the regulatory protein binding sites and operons in prokaryote genomes.
Nucleic Acids Res. 2004 Jul 1;32(Web Server issue):W318-20. doi: 10.1093/nar/gkh364.
4
WebLogo: a sequence logo generator.
Genome Res. 2004 Jun;14(6):1188-90. doi: 10.1101/gr.849004.
5
Role of efflux pumps and mutations in genes for topoisomerases II and IV in fluoroquinolone-resistant Pseudomonas aeruginosa strains.
Microb Drug Resist. 2003 Winter;9(4):323-8. doi: 10.1089/107662903322762743.
6
Transcriptome and proteome analysis of Bacillus subtilis gene expression in response to superoxide and peroxide stress.
Microbiology (Reading). 2004 Feb;150(Pt 2):497-512. doi: 10.1099/mic.0.26665-0.
7
Differential expression of two paralogous genes of Bacillus subtilis encoding single-stranded DNA binding protein.
J Bacteriol. 2004 Feb;186(4):1097-105. doi: 10.1128/JB.186.4.1097-1105.2004.
8
LexA-binding sequences in Gram-positive and cyanobacteria are closely related.
Mol Genet Genomics. 2004 Feb;271(1):40-9. doi: 10.1007/s00438-003-0952-x. Epub 2003 Dec 2.
9
In silico analysis reveals substantial variability in the gene contents of the gamma proteobacteria LexA-regulon.
Bioinformatics. 2003 Nov 22;19(17):2225-36. doi: 10.1093/bioinformatics/btg303.
10
LexA-independent DNA damage-mediated induction of gene expression in Myxococcus xanthus.
Mol Microbiol. 2003 Aug;49(3):769-81. doi: 10.1046/j.1365-2958.2003.03592.x.
Zotero 插件