Tanaka Shunsuke, Igarashi Satoshi, Ferri Stefano, Sode Koji
Department of Biotechnology, Tokyo University of Agriculture and Technology, 2-24-13 Naka-machi, Koganei, Tokyo, 184-8588, Japan.
BMC Biochem. 2005 Feb 16;6:1. doi: 10.1186/1471-2091-6-1.
Water-soluble quinoprotein glucose dehydrogenase (PQQGDH-B) from Acinetobacter calcoaceticus has a great potential for application as a glucose sensor constituent. Because this enzyme shows no activity in its monomeric form, correct quaternary structure is essential for the formation of active enzyme. We have previously reported on the increasing of the stability of PQQGDH-B by preventing the subunit dissociation. Previous studies were based on decreasing the entropy of quaternary structure dissociation but not on increasing the interaction between the two subunits. We therefore attempted to introduce a hydrophobic interaction in the dimeric interface to increase the stability of PQQGDH-B.
Amino acid residues Asn340 and Tyr418 face each other at the dimer interface of PQQGDH-B, however no interaction exists between their side chains. We simultaneously substituted Asn340 to Phe and Tyr418 to Phe or Ile, to create the two mutants Asn340Phe/Tyr418Phe and Asn340Phe/Tyr418Ile. Furthermore, residues Leu280, Val282 and Val342 form a hydrophobic region that faces, on the other subunit, residues Thr416 and Thr417, again without any specific interaction. We simultaneously substituted Thr416 and Thr417 to Val, to create the mutant Thr416Val/Thr417Val. The temperatures resulting in lose of half of the initial activity of the constructed mutants were increased by 3-4 degrees C higher over wild type. All mutants showed 2-fold higher thermal stability at 55 degrees C than the wild-type enzyme, without decreasing their catalytic activities. From the 3D models of all the mutant enzymes, the predicted binding energies were found to be significantly greater that in the wild-type enzyme, consistent with the increases in thermal stabilities.
We have achieved via site-directed mutagenesis the improvement of the thermal stability of PQQGDH-B by increasing the dimer interface interaction. Through rational design based on the quaternary structure of the enzyme, we selected residues located at the dimer interface that do not contribute to the intersubunit interaction. By substituting these residues to hydrophobic ones, the thermal stability of PQQGDH-B was increased without decreasing its catalytic activity.
醋酸钙不动杆菌的水溶性醌蛋白葡萄糖脱氢酶(PQQGDH-B)作为葡萄糖传感器成分具有巨大的应用潜力。由于这种酶以单体形式无活性,正确的四级结构对于活性酶的形成至关重要。我们之前报道过通过防止亚基解离来提高PQQGDH-B的稳定性。之前的研究基于降低四级结构解离的熵,而不是增加两个亚基之间的相互作用。因此,我们试图在二聚体界面引入疏水相互作用以提高PQQGDH-B的稳定性。
在PQQGDH-B的二聚体界面,氨基酸残基Asn340和Tyr418相互面对,但其侧链之间不存在相互作用。我们同时将Asn340替换为Phe,将Tyr418替换为Phe或Ile,创建了两个突变体Asn340Phe/Tyr418Phe和Asn340Phe/Tyr418Ile。此外,残基Leu280、Val282和Val342形成一个疏水区域,在另一个亚基上面对残基Thr416和Thr417,同样没有任何特异性相互作用。我们同时将Thr416和Thr417替换为Val,创建了突变体Thr416Val/Thr417Val。构建的突变体失去一半初始活性的温度比野生型高出3 - 4摄氏度。所有突变体在55摄氏度时的热稳定性比野生型酶高2倍,且不降低其催化活性。从所有突变酶的三维模型来看,预测的结合能明显高于野生型酶,这与热稳定性的提高一致。
我们通过定点诱变,通过增加二聚体界面相互作用实现了PQQGDH-B热稳定性的提高。通过基于酶四级结构的合理设计,我们选择了位于二聚体界面但对亚基间相互作用无贡献的残基。通过将这些残基替换为疏水残基,在不降低其催化活性的情况下提高了PQQGDH-B的热稳定性。