• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

不动杆菌葡萄糖脱氢酶是否产生自我损伤的 H2O2?

Does Acinetobacter calcoaceticus glucose dehydrogenase produce self-damaging H2O2?

机构信息

Centre de Recherche Paul Pascal (CRPP), University Bordeaux, CNRS, UMR 5031, Pessac, France.

Synchrotron SOLEIL (CNRS - CEA), Saint-Aubin, France.

出版信息

Biosci Rep. 2024 May 29;44(5). doi: 10.1042/BSR20240102.

DOI:10.1042/BSR20240102
PMID:38687614
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11130540/
Abstract

The soluble glucose dehydrogenase (sGDH) from Acinetobacter calcoaceticus has been widely studied and is used, in biosensors, to detect the presence of glucose, taking advantage of its high turnover and insensitivity to molecular oxygen. This approach, however, presents two drawbacks: the enzyme has broad substrate specificity (leading to imprecise blood glucose measurements) and shows instability over time (inferior to other oxidizing glucose enzymes). We report the characterization of two sGDH mutants: the single mutant Y343F and the double mutant D143E/Y343F. The mutants present enzyme selectivity and specificity of 1.2 (Y343F) and 5.7 (D143E/Y343F) times higher for glucose compared with that of the wild-type. Crystallographic experiments, designed to characterize these mutants, surprisingly revealed that the prosthetic group PQQ (pyrroloquinoline quinone), essential for the enzymatic activity, is in a cleaved form for both wild-type and mutant structures. We provide evidence suggesting that the sGDH produces H2O2, the level of production depending on the mutation. In addition, spectroscopic experiments allowed us to follow the self-degradation of the prosthetic group and the disappearance of sGDH's glucose oxidation activity. These studies suggest that the enzyme is sensitive to its self-production of H2O2. We show that the premature aging of sGDH can be slowed down by adding catalase to consume the H2O2 produced, allowing the design of a more stable biosensor over time. Our research opens questions about the mechanism of H2O2 production and the physiological role of this activity by sGDH.

摘要

来自醋酸钙不动杆菌的可溶性葡萄糖脱氢酶(sGDH)已被广泛研究,并在生物传感器中用于检测葡萄糖的存在,利用其高周转率和对分子氧的不敏感性。然而,这种方法有两个缺点:酶具有广泛的底物特异性(导致血糖测量不准确),并且随着时间的推移不稳定(不如其他氧化葡萄糖酶)。我们报告了两种 sGDH 突变体的特征:单个突变体 Y343F 和双突变体 D143E/Y343F。与野生型相比,突变体的酶选择性和特异性分别提高了 1.2 倍(Y343F)和 5.7 倍(D143E/Y343F)。旨在表征这些突变体的晶体学实验令人惊讶地表明,对于酶活性至关重要的辅基 PQQ(吡咯喹啉醌)对于野生型和突变型结构均处于裂解形式。我们提供的证据表明,sGDH 产生 H2O2,其产生水平取决于突变。此外,光谱实验使我们能够跟踪辅基的自降解和 sGDH 葡萄糖氧化活性的丧失。这些研究表明,该酶对其自身产生的 H2O2 敏感。我们表明,通过添加过氧化氢酶来消耗产生的 H2O2,可以减缓 sGDH 的过早老化,从而随着时间的推移设计出更稳定的生物传感器。我们的研究提出了关于 H2O2 产生的机制以及 sGDH 这种活性的生理作用的问题。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/b4f5e6c9a2b7/bsr-44-bsr20240102-g6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/b405cf72aaa8/bsr-44-bsr20240102-g1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/6c3ea32dbc36/bsr-44-bsr20240102-g2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/22d1e10b6d88/bsr-44-bsr20240102-g3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/e85245463ad0/bsr-44-bsr20240102-g4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/e869c2d87931/bsr-44-bsr20240102-g5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/b4f5e6c9a2b7/bsr-44-bsr20240102-g6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/b405cf72aaa8/bsr-44-bsr20240102-g1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/6c3ea32dbc36/bsr-44-bsr20240102-g2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/22d1e10b6d88/bsr-44-bsr20240102-g3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/e85245463ad0/bsr-44-bsr20240102-g4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/e869c2d87931/bsr-44-bsr20240102-g5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/bb30/11130540/b4f5e6c9a2b7/bsr-44-bsr20240102-g6.jpg

相似文献

1
Does Acinetobacter calcoaceticus glucose dehydrogenase produce self-damaging H2O2?不动杆菌葡萄糖脱氢酶是否产生自我损伤的 H2O2?
Biosci Rep. 2024 May 29;44(5). doi: 10.1042/BSR20240102.
2
Ca2+-assisted, direct hydride transfer, and rate-determining tautomerization of C5-reduced PQQ to PQQH2, in the oxidation of beta-D-glucose by soluble, quinoprotein glucose dehydrogenase.在可溶性醌蛋白葡萄糖脱氢酶氧化β-D-葡萄糖的过程中,Ca2+辅助的、直接的氢化物转移以及C5还原型吡咯喹啉醌(PQQ)向吡咯喹啉醌二氢化物(PQQH2)的速率决定互变异构。
Biochemistry. 2000 Aug 8;39(31):9384-92. doi: 10.1021/bi992810x.
3
Soluble aldose sugar dehydrogenase from Escherichia coli: a highly exposed active site conferring broad substrate specificity.来自大肠杆菌的可溶性醛糖脱氢酶:具有广泛底物特异性的高度暴露活性位点。
J Biol Chem. 2006 Oct 13;281(41):30650-9. doi: 10.1074/jbc.M601783200. Epub 2006 Jul 24.
4
Ca(2+) stabilizes the semiquinone radical of pyrroloquinoline quinone.钙离子可稳定吡咯喹啉醌的半醌自由基。
Biochem J. 2001 Aug 1;357(Pt 3):893-8. doi: 10.1042/0264-6021:3570893.
5
Efficient direct electron transfer of PQQ-glucose dehydrogenase on carbon cryogel electrodes at neutral pH.在中性 pH 条件下,PQQ-葡萄糖脱氢酶在碳 cryogel 电极上的有效直接电子转移。
Anal Chem. 2011 Jul 15;83(14):5721-7. doi: 10.1021/ac200981r. Epub 2011 Jun 21.
6
Ca2+ and its substitutes have two different binding sites and roles in soluble, quinoprotein (pyrroloquinoline-quinone-containing) glucose dehydrogenase.钙离子及其替代物在可溶性醌蛋白(含吡咯喹啉醌)葡萄糖脱氢酶中具有两个不同的结合位点和作用。
Eur J Biochem. 1997 Jul 15;247(2):659-65. doi: 10.1111/j.1432-1033.1997.00659.x.
7
Production, characterization, and reconstitution of recombinant quinoprotein glucose dehydrogenase (soluble type; EC 1.1.99.17) apoenzyme of Acinetobacter calcoaceticus.乙酸钙不动杆菌重组喹蛋白葡萄糖脱氢酶(可溶性类型;EC 1.1.99.17)脱辅酶的制备、表征及复性
Arch Biochem Biophys. 1996 Dec 1;336(1):42-8. doi: 10.1006/abbi.1996.0530.
8
Dehydrogenase, a Pyrroloquinoline Quinone-Dependent Member of Auxiliary Activity Family 12 of the Carbohydrate-Active Enzymes Database: Functional and Structural Characterization.依赖吡咯喹啉醌的脱氢酶:碳水化合物活性酶数据库辅助活性家族 12 的成员:功能和结构特征。
Appl Environ Microbiol. 2019 Nov 27;85(24). doi: 10.1128/AEM.00964-19. Print 2019 Dec 15.
9
Development of a novel glucose enzyme fuel cell system employing protein engineered PQQ glucose dehydrogenase.采用蛋白质工程化吡咯喹啉醌葡萄糖脱氢酶的新型葡萄糖酶燃料电池系统的开发。
Biosens Bioelectron. 2005 Apr 15;20(10):2145-50. doi: 10.1016/j.bios.2004.08.017.
10
Biofuel cells based on direct enzyme-electrode contacts using PQQ-dependent glucose dehydrogenase/bilirubin oxidase and modified carbon nanotube materials.基于直接酶电极接触的生物燃料电池,使用 PQQ 依赖性葡萄糖脱氢酶/胆红素氧化酶和修饰的碳纳米管材料。
Biosens Bioelectron. 2014 Nov 15;61:631-8. doi: 10.1016/j.bios.2014.05.027. Epub 2014 Jun 3.

本文引用的文献

1
A Bacterial Myeloperoxidase with Antimicrobial Properties.一种具有抗菌特性的细菌髓过氧化物酶。
BioTech (Basel). 2023 May 5;12(2):33. doi: 10.3390/biotech12020033.
2
NAD(P)-dependent glucose dehydrogenase: Applications for biosensors, bioelectrodes, and biofuel cells.烟酰胺腺嘌呤二核苷酸(磷酸)依赖性葡萄糖脱氢酶:在生物传感器、生物电极和生物燃料电池中的应用。
Bioelectrochemistry. 2020 Oct;135:107574. doi: 10.1016/j.bioelechem.2020.107574. Epub 2020 May 23.
3
Mechanism of Reconstitution/Activation of the Soluble PQQ-Dependent Glucose Dehydrogenase from : A Comprehensive Study.
来自[具体来源]的可溶性吡咯喹啉醌依赖性葡萄糖脱氢酶的重组/激活机制:一项综合研究
ACS Omega. 2020 Jan 23;5(4):2015-2026. doi: 10.1021/acsomega.9b04034. eCollection 2020 Feb 4.
4
FAD dependent glucose dehydrogenases - Discovery and engineering of representative glucose sensing enzymes.依赖黄素腺嘌呤二核苷酸的葡萄糖脱氢酶——代表性葡萄糖感应酶的发现与工程改造。
Bioelectrochemistry. 2020 Apr;132:107414. doi: 10.1016/j.bioelechem.2019.107414. Epub 2019 Nov 20.
5
X-ray structure of the direct electron transfer-type FAD glucose dehydrogenase catalytic subunit complexed with a hitchhiker protein.X 射线结构直接电子转移型 FAD 葡萄糖脱氢酶催化亚基与搭便车蛋白复合物。
Acta Crystallogr D Struct Biol. 2019 Sep 1;75(Pt 9):841-851. doi: 10.1107/S2059798319010878. Epub 2019 Aug 28.
6
MolProbity: More and better reference data for improved all-atom structure validation.MolProbity:用于改进全原子结构验证的更多更好的参考数据。
Protein Sci. 2018 Jan;27(1):293-315. doi: 10.1002/pro.3330. Epub 2017 Nov 27.
7
Estimate your dose: RADDOSE-3D.估算你的剂量:RADDOSE-3D。
Protein Sci. 2018 Jan;27(1):217-228. doi: 10.1002/pro.3302. Epub 2017 Nov 6.
8
: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions.用于大分子溶液小角散射的综合数据分析套件。
J Appl Crystallogr. 2017 Jun 26;50(Pt 4):1212-1225. doi: 10.1107/S1600576717007786. eCollection 2017 Aug 1.
9
Polder maps: improving OMIT maps by excluding bulk solvent.Polder 图:通过排除主体溶剂来改进 OMIT 图。
Acta Crystallogr D Struct Biol. 2017 Feb 1;73(Pt 2):148-157. doi: 10.1107/S2059798316018210.
10
An enzymatic glucose/O2 biofuel cell operating in human blood.在人体血液中运行的酶葡萄糖/O2 生物燃料电池。
Biosens Bioelectron. 2016 Sep 15;83:60-7. doi: 10.1016/j.bios.2016.04.016. Epub 2016 Apr 12.