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本文引用的文献

1
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J Biochem Biophys Methods. 2004 May 31;59(2):145-57. doi: 10.1016/j.jbbm.2003.12.005.
2
Molecular epidemiology of mumps virus in Japan and proposal of two new genotypes.日本流行性腮腺炎病毒的分子流行病学及两种新基因型的提议
J Med Virol. 2004 May;73(1):97-104. doi: 10.1002/jmv.20065.
3
Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of West Nile virus.用于快速检测西尼罗河病毒的实时逆转录环介导等温扩增技术
J Clin Microbiol. 2004 Jan;42(1):257-63. doi: 10.1128/JCM.42.1.257-263.2004.
4
Rapid diagnosis of human herpesvirus 6 infection by a novel DNA amplification method, loop-mediated isothermal amplification.通过一种新型DNA扩增方法——环介导等温扩增法快速诊断人疱疹病毒6型感染
J Clin Microbiol. 2004 Jan;42(1):140-5. doi: 10.1128/JCM.42.1.140-145.2004.
5
Loop-mediated isothermal amplification for detection of African trypanosomes.用于检测非洲锥虫的环介导等温扩增技术。
J Clin Microbiol. 2003 Dec;41(12):5517-24. doi: 10.1128/JCM.41.12.5517-5524.2003.
6
Comparison between indirect immunofluorescence assay and shell vial culture for detection of mumps virus from clinical samples.间接免疫荧光测定法与空斑试验培养法用于从临床样本中检测腮腺炎病毒的比较。
J Clin Microbiol. 2003 Nov;41(11):5186-7. doi: 10.1128/JCM.41.11.5186-5187.2003.
7
Detection of bacteria carrying the stx2 gene by in situ loop-mediated isothermal amplification.通过原位环介导等温扩增检测携带stx2基因的细菌
Appl Environ Microbiol. 2003 Aug;69(8):5023-8. doi: 10.1128/AEM.69.8.5023-5028.2003.
8
Loop-mediated isothermal amplification for direct detection of Mycobacterium tuberculosis complex, M. avium, and M. intracellulare in sputum samples.用于直接检测痰液样本中结核分枝杆菌复合群、鸟分枝杆菌和胞内分枝杆菌的环介导等温扩增技术。
J Clin Microbiol. 2003 Jun;41(6):2616-22. doi: 10.1128/JCM.41.6.2616-2622.2003.
9
An outbreak of mumps in the metropolitan area of Walsall, UK.英国沃尔索尔都会区爆发腮腺炎疫情。
Int J Infect Dis. 2002 Dec;6(4):283-7. doi: 10.1016/s1201-9712(02)90162-1.
10
Quantitation of respiratory syncytial virus RNA in nasal aspirates of children by real-time RT-PCR assay.通过实时逆转录聚合酶链反应法对儿童鼻吸出物中的呼吸道合胞病毒RNA进行定量分析。
J Virol Methods. 2003 Apr;109(1):39-45. doi: 10.1016/s0166-0934(03)00042-9.

用于通过环介导等温扩增检测腮腺炎病毒基因组的快速诊断方法。

Rapid diagnostic method for detection of mumps virus genome by loop-mediated isothermal amplification.

作者信息

Okafuji Takao, Yoshida Naoko, Fujino Motoko, Motegi Yoshie, Ihara Toshiaki, Ota Yoshinori, Notomi Tsugunori, Nakayama Tetsuo

机构信息

Okafuji Pediatric Clinic, Himeji, Hyougo, Japan.

出版信息

J Clin Microbiol. 2005 Apr;43(4):1625-31. doi: 10.1128/JCM.43.4.1625-1631.2005.

DOI:10.1128/JCM.43.4.1625-1631.2005
PMID:15814976
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1081329/
Abstract

Most mumps patients are clinically diagnosed without any virological examinations, but some diagnosed cases of mumps may be caused by other pathogens or secondary vaccine failure (SVF). To clarify these issues, a sensitive, specific, and rapid diagnostic method is required. We obtained 60 salivary swabs from 34 patients with natural infection during the course of the illness, 10 samples from patients with vaccine-associated parotitis, and 5 samples from patients with SVF. Total RNA was extracted and subjected to reverse transcription-PCR (RT-PCR) and loop-mediated isothermal amplification (LAMP) for genome amplification. We detected mumps virus RNA corresponding to 0.1 PFU by LAMP within 60 min after RNA extraction, with the same sensitivity as RT-nested PCR. Mumps virus was isolated in 30 of 33 samples within day 2, and mumps virus genome was amplified by LAMP in 32 of them. The quantity of virus titer was calculated by monitoring the time to reach the threshold of turbidity. The viral load decreased after day 3 and was lower in patients serologically diagnosed as having SVF with milder illness. Accuracy of LAMP for the detection of mumps virus genome was confirmed; furthermore, it is of benefit for calculating the viral load, which reflects disease pathogenesis.

摘要

大多数腮腺炎患者无需任何病毒学检查即可临床诊断,但部分诊断为腮腺炎的病例可能由其他病原体或疫苗接种失败(SVF)继发引起。为阐明这些问题,需要一种灵敏、特异且快速的诊断方法。我们从34例自然感染患者病程中获取了60份唾液拭子、从疫苗相关腮腺炎患者中获取了10份样本以及从疫苗接种失败患者中获取了5份样本。提取总RNA并进行逆转录聚合酶链反应(RT-PCR)和环介导等温扩增(LAMP)以进行基因组扩增。我们通过LAMP在RNA提取后60分钟内检测到相当于0.1个蚀斑形成单位(PFU)的腮腺炎病毒RNA,其灵敏度与RT巢式PCR相同。33份样本中有30份在第2天内分离出腮腺炎病毒,其中32份通过LAMP扩增出腮腺炎病毒基因组。通过监测达到浊度阈值的时间来计算病毒滴度。病毒载量在第3天后下降,在血清学诊断为疫苗接种失败且病情较轻的患者中较低。LAMP检测腮腺炎病毒基因组的准确性得到了证实;此外,它有助于计算反映疾病发病机制的病毒载量。