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白陵鞘氨醇单胞菌新种,一种从韩国黄海海水中分离出的橙色色素细菌。

Sphingopyxis baekryungensis sp. nov., an orange-pigmented bacterium isolated from sea water of the Yellow Sea in Korea.

作者信息

Yoon Jung-Hoon, Lee Choong-Hwan, Yeo Soo-Hwan, Oh Tae-Kwang

机构信息

Laboratory of Microbial Function, Korea Research Institute of Bioscience and Biotechnology (KRIBB), PO Box 115, Yusong, Taejon, Korea.

Center for Traditional Microorganism Resources, Keimyung University, Shindang-dong, Dalseo-gu, Daegu, Korea.

出版信息

Int J Syst Evol Microbiol. 2005 May;55(Pt 3):1223-1227. doi: 10.1099/ijs.0.63495-0.

Abstract

A Gram-negative, motile, slightly halophilic bacterial strain, SW-150(T), was isolated from sea water of the Yellow Sea, Korea, and was characterized by a polyphasic taxonomic approach. Strain SW-150(T) grew optimally at 25-30 degrees C and in the presence of 2 % (w/v) NaCl. The isolate could be distinguished from other Sphingopyxis species in producing an orange pigment. It contained ubiquinone-10 as the predominant respiratory lipoquinone and C(18 : 1)omega7c and C(17 : 1)omega6c as the major fatty acids. No 3-hydroxy fatty acids were detected. Major polar lipids were sphingoglycolipid, diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The DNA G+C content was 63 mol%. Comparative 16S rRNA gene sequence analyses showed that strain SW-150(T) was phylogenetically affiliated to the genus Sphingopyxis of the family Sphingomonadaceae. Similarity values between the 16S rRNA gene sequences of strain SW-150(T) and the type strains of Sphingopyxis species ranged from 91.6 to 94.2 %, making it possible to categorize strain SW-150(T) as a species that is separate from previously described Sphingopyxis species. On the basis of phenotypic properties and phylogenetic distinctiveness, SW-150(T) (=KCTC 12231(T) = DSM 16222(T)) should be classified as the type strain of a novel Sphingopyxis species, for which the name Sphingopyxis baekryungensis sp. nov. is proposed.

摘要

从韩国黄海海水中分离出一株革兰氏阴性、具运动性、轻度嗜盐的细菌菌株SW-150(T),并采用多相分类方法对其进行了表征。菌株SW-150(T)在25-30℃和2%(w/v)NaCl存在的条件下生长最佳。该分离株可通过产生橙色色素与其他鞘氨醇单胞菌属物种区分开来。它含有泛醌-10作为主要的呼吸性脂醌,C(18 : 1)ω7c和C(17 : 1)ω6c作为主要脂肪酸。未检测到3-羟基脂肪酸。主要极性脂为鞘氨醇糖脂、双磷脂酰甘油、磷脂酰甘油和磷脂酰乙醇胺。DNA G+C含量为63 mol%。比较16S rRNA基因序列分析表明,菌株SW-150(T)在系统发育上隶属于鞘氨醇单胞菌科的鞘氨醇单胞菌属。菌株SW-150(T)的16S rRNA基因序列与鞘氨醇单胞菌属模式菌株之间的相似性值在91.6%至94.2%之间,这使得菌株SW-150(T)有可能被归类为一个与先前描述的鞘氨醇单胞菌属物种不同的物种。基于表型特征和系统发育独特性,SW-150(T)(=KCTC 12231(T)=DSM 16222(T))应被分类为一个新的鞘氨醇单胞菌属物种的模式菌株,为此提出了新名称白翎鞘氨醇单胞菌(Sphingopyxis baekryungensis sp. nov.)。

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