Hewitson K S, Granatino N, Welford R W D, McDonough M A, Schofield C J
The Department of Chemistry and The Oxford Centre for Molecular Sciences, Chemistry Research Laboratory, Mansfield Road, Oxford OX1 3TA, UK.
Philos Trans A Math Phys Eng Sci. 2005 Apr 15;363(1829):807-28; discussion 1035-40. doi: 10.1098/rsta.2004.1540.
The 2-oxoglutarate (2OG) and ferrous iron dependent oxygenases are a superfamily of enzymes that catalyse a wide range of reactions including hydroxylations, desaturations and oxidative ring closures. Recently, it has been discovered that they act as sensors in the hypoxic response in humans and other animals. Substrate oxidation is coupled to conversion of 2OG to succinate and carbon dioxide. Kinetic, spectroscopic and structural studies are consistent with a consensus mechanism in which ordered binding of (co)substrates enables control of reactive intermediates. Binding of the substrate to the active site triggers the enzyme for ligation of dioxygen to the metal. Oxidative decarboxylation of 2OG then generates the ferryl species thought to mediate substrate oxidation. Structural studies reveal a conserved double-stranded beta-helix core responsible for binding the iron, via a 2His-1carboxylate motif and the 2OG side chain. The rigidity of this core contrasts with the conformational flexibility of surrounding regions that are involved in binding the substrate. Here we discuss the roles of 2OG oxygenases in terms of the generic structural and mechanistic features that render the 2OG oxygenases suited for their functions.
2-氧代戊二酸(2OG)和依赖亚铁的加氧酶是一类酶超家族,可催化多种反应,包括羟基化、去饱和作用和氧化闭环反应。最近发现,它们在人类和其他动物的低氧反应中充当传感器。底物氧化与2OG转化为琥珀酸和二氧化碳相偶联。动力学、光谱学和结构研究与一种共识机制一致,即(共)底物的有序结合能够控制反应中间体。底物与活性位点的结合触发酶将双加氧连接到金属上。然后2OG的氧化脱羧产生被认为介导底物氧化的高价铁物种。结构研究揭示了一个保守的双链β-螺旋核心,该核心通过一个2His-1羧酸盐基序和2OG侧链负责结合铁。该核心的刚性与参与结合底物的周围区域的构象灵活性形成对比。在此,我们根据使2OG加氧酶适合其功能的一般结构和机制特征,讨论2OG加氧酶的作用。