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铜绿假单胞菌AlgZ与algZ启动子上游位点的结合导致转录抑制。

Binding of Pseudomonas aeruginosa AlgZ to sites upstream of the algZ promoter leads to repression of transcription.

作者信息

Ramsey Deborah M, Baynham Patricia J, Wozniak Daniel J

机构信息

Department of Microbiology and Immunology, Wake Forest University School of Medicine, Medical Center Blvd., Winston-Salem, NC 27157, USA.

出版信息

J Bacteriol. 2005 Jul;187(13):4430-43. doi: 10.1128/JB.187.13.4430-4443.2005.

Abstract

Mucoid variants of the opportunistic pathogen Pseudomonas aeruginosa produce the exopolysaccharide alginate and colonize the respiratory tracts of cystic fibrosis patients. The genes encoding the alginate biosynthetic enzymes are clustered in a single operon, which is under tight transcriptional control. One essential activator of the alginate operon is AlgZ, a proposed ribbon-helix-helix DNA binding protein that shares 30% amino acid identity with the Mnt repressor of Salmonella enterica serovar Typhimurium bacteriophage P22. In the current study, we examined the role of AlgZ as an autoregulator. Using single-copy algZ-lacZ transcription fusions, an increase in algZ transcription was observed in an algZ mutant compared to the isogenic wild-type strain, suggesting that AlgZ may have an additional role as a repressor. To identify the AlgZ binding site, overlapping regions upstream of algZ were incubated with AlgZ and analyzed by electrophoretic mobility shift assays. Specific binding activity was localized to a region spanning from 66 to 185 base pairs upstream of the algZ transcriptional start site. Two AlgZ binding sites were defined using copper-phenanthroline footprinting and deletion analyses, with one site centered at 93 base pairs and the other centered at 161 base pairs upstream of the algZ promoter. Deletion of both binding sites resulted in the loss of AlgZ binding. These results indicate that AlgZ represses algZ transcription, and this activity is mediated by multiple AlgZ-DNA interactions.

摘要

机会致病菌铜绿假单胞菌的黏液样变体产生胞外多糖藻酸盐,并定植于囊性纤维化患者的呼吸道。编码藻酸盐生物合成酶的基因聚集在一个单一操纵子中,该操纵子受到严格的转录控制。藻酸盐操纵子的一个重要激活因子是AlgZ,它是一种推测的带状 - 螺旋 - 螺旋DNA结合蛋白,与鼠伤寒沙门氏菌噬菌体P22的Mnt阻遏物具有30%的氨基酸同一性。在本研究中,我们研究了AlgZ作为自动调节因子的作用。使用单拷贝algZ - lacZ转录融合体,与同基因野生型菌株相比,在algZ突变体中观察到algZ转录增加,这表明AlgZ可能还具有阻遏物的作用。为了鉴定AlgZ结合位点,将algZ上游的重叠区域与AlgZ一起温育,并通过电泳迁移率变动分析进行分析。特异性结合活性定位于algZ转录起始位点上游66至185个碱基对的区域。使用铜 - 菲咯啉足迹法和缺失分析确定了两个AlgZ结合位点,一个位点位于algZ启动子上游93个碱基对处,另一个位点位于algZ启动子上游161个碱基对处。两个结合位点的缺失导致AlgZ结合丧失。这些结果表明AlgZ抑制algZ转录,并且这种活性是由多种AlgZ - DNA相互作用介导的。

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