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苔藓(小立碗藓)功能基因组学——基因发现与工具开发及其对农作物和人类健康的意义

Moss (Physcomitrella patens) functional genomics--Gene discovery and tool development, with implications for crop plants and human health.

作者信息

Reski Ralf, Frank Wolfgang

机构信息

Plant Biotechnology, Faculty of Biology, University of Freiburg, Schaenzlestr. 1, 79104 Freiburg, Germany.

出版信息

Brief Funct Genomic Proteomic. 2005 May;4(1):48-57. doi: 10.1093/bfgp/4.1.48.

DOI:10.1093/bfgp/4.1.48
PMID:15975264
Abstract

Recently, the moss Physcomitrella patens was established as a versatile tool in plant functional genomics. Mosses represent the oldest living clade of land plants, separated by approximately 450 million years of evolution from crop plants. Consequently, mosses contain metabolites and genes not known from these seed plants. In Physcomitrella, nuclear genes can be targeted by homologous recombination as efficiently as in yeast, allowing reverse genetics approaches in plants at high-throughput levels for the first time. Comprehensive expressed sequence tag databases gave new insights into the levels of diversity in land plants which are now ready to be exploited in plant biotechnology. In forward genetics screens, saturated tagged mutant collections help to unravel novel gene - function relationships. Additionally, proteomics tools are at hand to analyse subcellular proteomes, as well as the phosphoproteome, as the core of eukaryotic signal transduction. Moreover, specifically designed Physcomitrella strains can produce human therapeutic proteins safely and cost-effectively in bioreactors.

摘要

最近,小立碗藓被确立为植物功能基因组学中的一种多功能工具。苔藓是现存最古老的陆地植物分支,与农作物植物在进化上相隔约4.5亿年。因此,苔藓含有这些种子植物中未知的代谢物和基因。在小立碗藓中,核基因可以像在酵母中一样高效地通过同源重组进行靶向操作,首次使植物能够在高通量水平上采用反向遗传学方法。全面的表达序列标签数据库为陆地植物的多样性水平提供了新的见解,现在这些见解已准备好在植物生物技术中加以利用。在前向遗传学筛选中,饱和标记突变体文库有助于揭示新的基因-功能关系。此外,蛋白质组学工具可用于分析亚细胞蛋白质组以及作为真核信号转导核心的磷酸化蛋白质组。此外,经过特殊设计的小立碗藓菌株能够在生物反应器中安全且经济高效地生产人类治疗性蛋白质。

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Moss (Physcomitrella patens) functional genomics--Gene discovery and tool development, with implications for crop plants and human health.苔藓(小立碗藓)功能基因组学——基因发现与工具开发及其对农作物和人类健康的意义
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[The moss Physcomitrella patens, a new model system for functional genomics].[苔藓植物小立碗藓,一种用于功能基因组学的新型模式系统]
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A new moss genetics: targeted mutagenesis in Physcomitrella patens.一种新的苔藓遗传学:小立碗藓中的靶向诱变
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An improved and highly standardised transformation procedure allows efficient production of single and multiple targeted gene-knockouts in a moss, Physcomitrella patens.一种经过改进且高度标准化的转化程序能够在小立碗藓中高效产生单个和多个靶向基因敲除。
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An ancient genome duplication contributed to the abundance of metabolic genes in the moss Physcomitrella patens.一次古老的基因组加倍事件促成了小立碗藓中代谢基因的丰富。
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A tool for understanding homologous recombination in plants.一种用于理解植物同源重组的工具。
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Direct observation of the effects of cellulose synthesis inhibitors using live cell imaging of Cellulose Synthase (CESA) in Physcomitrella patens.利用 Physcomitrella patens 中活细胞成像观察纤维素合成抑制剂对纤维素合酶(CESA)的影响。
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Genome-wide transcriptomic analysis of the sporophyte of the moss Physcomitrella patens.对拟南芥孢子体的全基因组转录组分析。
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