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[水稻卷叶的一个主要数量性状基因座定位及物理图谱构建]

[One major QTL mapping and physical map construction for rolled leaf in rice].

作者信息

Shao Yuan-Jian, Chen Zong-Xiang, Zhang Ya-Fang, Chen En-Hui, Qi Ding-Cheng, Miao Jin, Pan Xue-Biao

机构信息

Agricultural College of Yangzhou University, Yangzhou 225009, China.

出版信息

Yi Chuan Xue Bao. 2005 May;32(5):501-6.

PMID:16018261
Abstract

A clonally propagated F2 population (F2CP), derived from the rice cross of Qimiaoxiang/91SP068, was used to map rolled leaf QTLs. As the parent Qimiaoxiang is an unrolling leaf variety, while 91SP068 is a medium rolling variety with about 34% rolling index. One major QTL, rl8, which came from 91SP068, was mapped between two flanking SSR markers, RM6954 and RM6841, on chromosome 5, with genetic distance 3.8 cM, and was 1.0 cM away from RM6954. Its additive effect estimated by composite interval mapping (CIM) was 9.61 in 2002 and 6.23 in 2003, and the dominance effect was also different between two years, -1.19 in 2002 and -4.44 in 2003, respectively. It explained about 20% - 33% of the total phenotypic variation between two years. Furthermore, an integrated physical and genetic map encompassing rl8 region was constructed, and the physical distance of the interval was 542 kb, and the ratio of physical to genetic distance was 144 kb/cM. Based on this research, fine mapping of rolled leaf QTLs will not only facilitate the map-based cloning of the gene itself, but also improve the efficiency of marker-assisted selection in plant breeding.

摘要

利用从水稻品种七妙香与91SP068杂交后代中衍生出的一个克隆繁殖的F2群体(F2CP)来定位卷叶QTL。由于亲本七妙香是一个叶片不卷曲的品种,而91SP068是一个中度卷叶品种,卷叶指数约为34%。一个来自91SP068的主效QTL,rl8,被定位在第5染色体上的两个侧翼SSR标记RM6954和RM6841之间,遗传距离为3.8 cM,且与RM6954相距1.0 cM。通过复合区间作图(CIM)估计其在2002年的加性效应为9.61,在2003年为6.23,两年间的显性效应也不同,分别为2002年的-1.19和2003年的-4.44。它解释了两年间总表型变异的约20% - 33%。此外,构建了一个包含rl8区域的物理和遗传整合图谱,该区间的物理距离为542 kb,物理与遗传距离的比率为144 kb/cM。基于这项研究,卷叶QTLs的精细定位不仅将有助于该基因本身的图位克隆,还将提高植物育种中标记辅助选择的效率。

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Joint Mapping and Allele Mining of the Rolled Leaf Trait in Rice (Oryza sativa L.).水稻(Oryza sativa L.)卷叶性状的联合定位与等位基因挖掘
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Semi-Rolled Leaf2 modulates rice leaf rolling by regulating abaxial side cell differentiation.
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J Exp Bot. 2016 Apr;67(8):2139-50. doi: 10.1093/jxb/erw029. Epub 2016 Feb 11.
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J Genet. 2013 Dec;92(3):471-80. doi: 10.1007/s12041-013-0297-0.
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Semi-rolled leaf1 encodes a putative glycosylphosphatidylinositol-anchored protein and modulates rice leaf rolling by regulating the formation of bulliform cells.半卷叶 1 基因编码一个假定的糖基磷脂酰肌醇锚定蛋白,通过调节泡状细胞的形成来调节水稻叶片卷曲。
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