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The bacteriophage P1 hot gene product can substitute for the Escherichia coli DNA polymerase III {theta} subunit.噬菌体P1的热基因产物可替代大肠杆菌DNA聚合酶III的θ亚基。
J Bacteriol. 2005 Aug;187(16):5528-36. doi: 10.1128/JB.187.16.5528-5536.2005.
2
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Phage like it HOT: solution structure of the bacteriophage P1-encoded HOT protein, a homolog of the theta subunit of E. coli DNA polymerase III.噬菌体喜欢高温:噬菌体P1编码的HOT蛋白的溶液结构,它是大肠杆菌DNA聚合酶III的θ亚基的同源物。
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本文引用的文献

1
Phage like it HOT: solution structure of the bacteriophage P1-encoded HOT protein, a homolog of the theta subunit of E. coli DNA polymerase III.噬菌体喜欢高温:噬菌体P1编码的HOT蛋白的溶液结构,它是大肠杆菌DNA聚合酶III的θ亚基的同源物。
Structure. 2004 Dec;12(12):2221-31. doi: 10.1016/j.str.2004.09.019.
2
Genome of bacteriophage P1.噬菌体P1的基因组。
J Bacteriol. 2004 Nov;186(21):7032-68. doi: 10.1128/JB.186.21.7032-7068.2004.
3
Application of electrospray ionization mass spectrometry to study the hydrophobic interaction between the epsilon and theta subunits of DNA polymerase III.应用电喷雾电离质谱法研究DNA聚合酶III的ε亚基和θ亚基之间的疏水相互作用。
Protein Sci. 2004 Nov;13(11):2878-87. doi: 10.1110/ps.04889604. Epub 2004 Sep 30.
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The theta subunit of Escherichia coli DNA polymerase III: a role in stabilizing the epsilon proofreading subunit.大肠杆菌DNA聚合酶III的θ亚基:在稳定ε校对亚基中的作用。
J Bacteriol. 2004 May;186(9):2774-80. doi: 10.1128/JB.186.9.2774-2780.2004.
5
Functional uncoupling of twin polymerases: mechanism of polymerase dissociation from a lagging-strand block.双聚合酶的功能解偶联:聚合酶从滞后链阻滞处解离的机制
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Mechanism of loading the Escherichia coli DNA polymerase III sliding clamp: I. Two distinct activities for individual ATP sites in the gamma complex.大肠杆菌DNA聚合酶III滑动夹加载机制:I. γ复合体中单个ATP位点的两种不同活性。
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Can tRNAs act as antisense RNA? The case of mutA and dnaQ.
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Chromosomal replicases as asymmetric dimers: studies of subunit arrangement and functional consequences.作为不对称二聚体的染色体复制酶:亚基排列及其功能后果的研究
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The genome sequence of Blochmannia floridanus: comparative analysis of reduced genomes.佛罗里达布洛赫曼氏菌的基因组序列:精简基因组的比较分析。
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Elucidation of the epsilon-theta subunit interface of Escherichia coli DNA polymerase III by NMR spectroscopy.利用核磁共振光谱法阐明大肠杆菌DNA聚合酶III的ε-θ亚基界面
Biochemistry. 2003 Apr 8;42(13):3635-44. doi: 10.1021/bi0205451.

噬菌体P1的热基因产物可替代大肠杆菌DNA聚合酶III的θ亚基。

The bacteriophage P1 hot gene product can substitute for the Escherichia coli DNA polymerase III {theta} subunit.

作者信息

Chikova Anna K, Schaaper Roel M

机构信息

Laboratory of Molecular Genetics, National Institute of Environmental Health Sciences, P.O. Box 12233, Research Triangle Park, NC 27709, USA.

出版信息

J Bacteriol. 2005 Aug;187(16):5528-36. doi: 10.1128/JB.187.16.5528-5536.2005.

DOI:10.1128/JB.187.16.5528-5536.2005
PMID:16077097
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1196078/
Abstract

The theta subunit (holE gene product) of Escherichia coli DNA polymerase (Pol) III holoenzyme is a tightly bound component of the polymerase core. Within the core (alpha-epsilon-theta), the alpha and epsilon subunits carry the DNA polymerase and 3' proofreading functions, respectively, while the precise function of theta is unclear. holE homologs are present in genomes of other enterobacteriae, suggestive of a conserved function. Putative homologs have also been found in the genomes of bacteriophage P1 and of certain conjugative plasmids. The presence of these homologs is of interest, because these genomes are fully dependent on the host replication machinery and contribute few, if any, replication factors themselves. To study the role of these theta homologs, we have constructed an E. coli strain in which holE is replaced by the P1 homolog, hot. We show that hot is capable of substituting for holE when it is assayed for its antimutagenic action on the proofreading-impaired dnaQ49 mutator, which carries a temperature-sensitive epsilon subunit. The ability of hot to substitute for holE was also observed with other, although not all, dnaQ mutator alleles tested. The data suggest that the P1 hot gene product can substitute for the theta subunit and is likely incorporated in the Pol III complex. We also show that overexpression of either theta or Hot further suppresses the dnaQ49 mutator phenotype. This suggests that the complexing of dnaQ49-epsilon with theta is rate limiting for its ability to proofread DNA replication errors. The possible role of hot for bacteriophage P1 is discussed.

摘要

大肠杆菌DNA聚合酶(Pol)III全酶的θ亚基(holE基因产物)是聚合酶核心紧密结合的组分。在核心结构(α-ε-θ)中,α亚基和ε亚基分别承担DNA聚合酶功能和3'校对功能,而θ亚基的确切功能尚不清楚。holE同源物存在于其他肠杆菌的基因组中,提示其功能保守。在噬菌体P1和某些接合质粒的基因组中也发现了推定的同源物。这些同源物的存在令人感兴趣,因为这些基因组完全依赖宿主复制机制,自身几乎不提供复制因子(如果有的话)。为了研究这些θ同源物的作用,我们构建了一个大肠杆菌菌株,其中holE被P1同源物hot取代。我们发现,当检测hot对校对功能受损的dnaQ49突变体(其携带温度敏感型ε亚基)的抗诱变作用时,hot能够替代holE。在测试的其他(尽管不是全部)dnaQ突变体等位基因中也观察到hot替代holE的能力。数据表明,P1 hot基因产物可以替代θ亚基,并可能整合到Pol III复合物中。我们还表明,θ或Hot的过表达进一步抑制了dnaQ49突变体表型。这表明dnaQ49-ε与θ的复合对于其校对DNA复制错误的能力是限速的。本文讨论了hot对噬菌体P1可能的作用。