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通过热解亚稳原子轰击质谱法对弧菌分离株进行快速表型特征分析。

Rapid phenotypic characterization of Vibrio isolates by pyrolysis metastable atom bombardment mass spectrometry.

作者信息

Wilkes Jon G, Rushing Larry G, Gagnon Jean-François, McCarthy Susan A, Rafii Fatemeh, Khan Ashraf A, Kaysner Charles A, Heinze Thomas M, Sutherland John B

机构信息

Divisions of Systems Toxicology, Microbiology or Biochemical Toxicology, National Center for Toxicological Research, FDA, 3900 NCTR Drive, Jefferson, AR 72079, USA.

出版信息

Antonie Van Leeuwenhoek. 2005 Aug;88(2):151-61. doi: 10.1007/s10482-005-3990-z.

Abstract

Pyrolysis mass spectrometry was investigated for rapid characterization of food-borne bacterial pathogens. Nine isolates of Vibrio parahaemolyticus and one isolate each of Vibrio fluvialis, Vibrio hollisae, and Vibrio vulnificus were analyzed. Pyrolysis mass spectra, generated via an alternative ionization method, metastable atom bombardment, were subject to principal component-discriminant analysis. The spectral patterns were used to distinguish Vibrio isolates differing in species, serotype and expression of the thermostable direct hemolysin gene. The patterns of similarity and dissimilarity amongst spectra in the Vibrio test set generally reflected those associated with species, serotype or hemolysin-producing genes, though the combined influence of these and other variables in the multi-dimensional data did not produce a simple clustering with respect to any one of these characteristics. These results suggested that with enough examples to model the most common combinations, the method should be able to characterize Vibrio isolates according to their phenotypic characteristics. Pyrolysis-mass spectrometry with metastable atom bombardment and pattern recognition appeared suitable for rapid infraspecific comparison of Vibrio isolates. This integrated analytical, pattern-recognition system should be examined further for potential utility in clinical and public health diagnostic contexts.

摘要

研究了热解质谱法用于快速鉴定食源性病原体。分析了9株副溶血性弧菌以及各1株河流弧菌、霍利斯弧菌和创伤弧菌。通过一种替代电离方法——亚稳原子轰击产生的热解质谱图,进行主成分判别分析。光谱模式用于区分不同种、血清型和耐热直接溶血素基因表达的弧菌分离株。弧菌测试集中光谱之间的相似性和差异性模式通常反映了与种、血清型或溶血素产生基因相关的模式,尽管这些以及多维数据中其他变量的综合影响并未针对这些特征中的任何一个产生简单的聚类。这些结果表明,有足够的实例来模拟最常见的组合,该方法应该能够根据弧菌分离株的表型特征对其进行鉴定。具有亚稳原子轰击和模式识别功能的热解质谱法似乎适用于弧菌分离株的快速种内比较。这种集成的分析模式识别系统应进一步研究其在临床和公共卫生诊断环境中的潜在用途。

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