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顺铂与半胱氨酸和蛋氨酸的相互作用:一项理论密度泛函理论研究

Cisplatin interaction with cysteine and methionine, a theoretical DFT study.

作者信息

Zimmermann Tomás, Zeizinger Michal, Burda Jaroslav V

机构信息

Department of Chemical Physics and Optics, Faculty of Mathematics and Physics, Charles University, Ke Karlovu 3, 121 16 Prague 2, Czech Republic.

出版信息

J Inorg Biochem. 2005 Nov;99(11):2184-96. doi: 10.1016/j.jinorgbio.2005.07.021. Epub 2005 Sep 23.

DOI:10.1016/j.jinorgbio.2005.07.021
PMID:16183131
Abstract

Interactions of hydrated cisplatin complexes with sulphur-containing amino acids cysteine and methionine were explored. The square-planar cis-[Pt(NH3)2(H2O)X]+ complexes (where X=Cl- and OH-) were chosen as mono- and dihydrated reactants. Calculations using density functional theory (DFT) techniques with B3LYP functional were performed. The isolated molecules and the supermolecular approaches were employed for the determination of the reaction energies. Bond dissociation energies (BDE) were estimated in the model of isolated molecules and supermolecules were used for the determination of the association energies between the two interacting parts. Formation of monodentate complexes by replacing the aqua-ligand with the S, N, and O-sites of both amino acids represents an exothermic process. The highest BDE was found in cysteine structures for the Pt-S coordination. The bonding energy is about 114 kcal/mol, which is comparable with cisplatin-guanine adducts. Analogous BDE for methionine complexes is smaller by about 40 kcal/mol. This correlates well with the known fact that cysteine forms irreversible cisplatin adducts while similar adducts in the methionine case are reversible. The formation of chelate structures is an exothermic reaction only for the hydroxo-form of reactants in the supermolecular approach where additional association interactions between the released water and chelate molecules sufficiently stabilize the final product.

摘要

研究了水合顺铂配合物与含硫氨基酸半胱氨酸和蛋氨酸的相互作用。选择平面正方形的顺式-[Pt(NH₃)₂(H₂O)X]+配合物(其中X = Cl⁻和OH⁻)作为单水合和二水合反应物。使用密度泛函理论(DFT)技术和B3LYP泛函进行了计算。采用孤立分子和超分子方法来确定反应能量。在孤立分子模型中估计键解离能(BDE),并使用超分子来确定两个相互作用部分之间的缔合能。通过用两种氨基酸的S、N和O位点取代水配体形成单齿配合物是一个放热过程。在半胱氨酸结构中,Pt-S配位的BDE最高。键能约为114 kcal/mol,这与顺铂-鸟嘌呤加合物相当。蛋氨酸配合物的类似BDE约小40 kcal/mol。这与已知事实很好地相关,即半胱氨酸形成不可逆的顺铂加合物,而蛋氨酸情况下的类似加合物是可逆的。螯合结构的形成仅在超分子方法中对于反应物的羟基形式是放热反应,其中释放的水和螯合分子之间的额外缔合相互作用充分稳定了最终产物。

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