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一种新的酰胺质子R1rho实验能够精确表征微秒时间尺度的构象交换。

A new amide proton R1rho experiment permits accurate characterization of microsecond time-scale conformational exchange.

作者信息

Eichmüller Christian, Skrynnikov Nikolai R

机构信息

Department of Chemistry, Purdue University, 560 Oval Drive, West Lafayette, IN 47907-2084, USA.

出版信息

J Biomol NMR. 2005 Aug;32(4):281-93. doi: 10.1007/s10858-005-0658-y.

Abstract

A new off-resonance spin-lock experiment to record relaxation dispersion profiles of amide protons is presented. The sensitivity-enhanced HSQC-type sequence is designed to minimize the interference from cross-relaxation effects and ensure that the dispersion profiles in the absence of micros-ms time-scale dynamics are flat. Toward this end (i) the proton background is eliminated by sample deuteration (Ishima et al., 1998), (ii) 1H spin lock is applied to two-spin modes 2(H(x)Sin theta + H(z)Cos theta) N(z), and (iii) the tilt angle theta approximately 35 degrees is maintained throughout the series of measurements (Desvaux et al. Mol. Phys., 86 (1995) 1059). The relaxation dispersion profiles recorded in this manner sample a wide range of effective rf field strengths (up to and in excess of 20 kHz) which makes them particularly suitable for studies of motions on the time scale < or = 100 micros. The new experiment has been tested on the Ca2+-loaded regulatory domain of cardiac troponin C. Many residues show pronounced dispersions with remarkably similar correlation times of approximately 30 micros. Furthermore, these residues are localized in the regions that have been previously implicated in conformational changes (Spyracopoulos et al. Biochemistry, 36 (1997) 12138).

摘要

本文介绍了一种用于记录酰胺质子弛豫色散谱的新型非共振自旋锁定实验。设计了灵敏度增强的HSQC型序列,以尽量减少交叉弛豫效应的干扰,并确保在不存在微秒时间尺度动力学的情况下色散谱是平坦的。为此,(i)通过样品氘化消除质子背景(Ishima等人,1998年),(ii)将1H自旋锁定应用于双自旋模式2(H(x)Sinθ + H(z)Cosθ)N(z),以及(iii)在整个测量系列中保持倾斜角θ约为35度(Desvaux等人,《分子物理学》,86 (1995) 1059)。以这种方式记录的弛豫色散谱采样了广泛的有效射频场强(高达并超过20 kHz),这使得它们特别适合于研究时间尺度小于或等于100微秒的运动。该新实验已在加载Ca2+的心肌肌钙蛋白C调节域上进行了测试。许多残基显示出明显的色散,其相关时间非常相似,约为30微秒。此外,这些残基位于先前与构象变化有关的区域(Spyracopoulos等人,《生物化学》,36 (1997) 12138)。

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