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将时空群落组装过程与微生物代谢变化相耦合。

Coupling Spatiotemporal Community Assembly Processes to Changes in Microbial Metabolism.

作者信息

Graham Emily B, Crump Alex R, Resch Charles T, Fansler Sarah, Arntzen Evan, Kennedy David W, Fredrickson Jim K, Stegen James C

机构信息

Biological Sciences Division, Pacific Northwest National Laboratory Richland, WA, USA.

出版信息

Front Microbiol. 2016 Dec 16;7:1949. doi: 10.3389/fmicb.2016.01949. eCollection 2016.

Abstract

Community assembly processes generate shifts in species abundances that influence ecosystem cycling of carbon and nutrients, yet our understanding of assembly remains largely separate from ecosystem-level functioning. Here, we investigate relationships between assembly and changes in microbial metabolism across space and time in hyporheic microbial communities. We pair sampling of two habitat types (i.e., attached and planktonic) through seasonal and sub-hourly hydrologic fluctuation with null modeling and temporally explicit multivariate statistics. We demonstrate that multiple selective pressures-imposed by sediment and porewater physicochemistry-integrate to generate changes in microbial community composition at distinct timescales among habitat types. These changes in composition are reflective of contrasting associations of and with ecological selection and with seasonal changes in microbial metabolism. We present a conceptual model based on our results in which metabolism increases when oscillating selective pressures oppose temporally stable selective pressures. Our conceptual model is pertinent to both macrobial and microbial systems experiencing multiple selective pressures and presents an avenue for assimilating community assembly processes into predictions of ecosystem-level functioning.

摘要

群落构建过程会导致物种丰度发生变化,进而影响生态系统中碳和养分的循环,然而我们对群落构建的理解在很大程度上仍与生态系统水平的功能相分离。在此,我们研究了潜流微生物群落中群落构建与微生物代谢在时空上变化之间的关系。我们通过季节性和亚小时级别的水文波动,对两种栖息地类型(即附着型和浮游型)进行采样,并结合空模型和时间明确的多元统计方法。我们证明,由沉积物和孔隙水物理化学施加的多种选择压力相互作用,在不同的时间尺度上导致不同栖息地类型的微生物群落组成发生变化。这些组成上的变化反映了微生物与生态选择以及微生物代谢季节性变化之间的对比关系。我们根据研究结果提出了一个概念模型,即在振荡选择压力与时间上稳定的选择压力相反时,代谢会增加。我们的概念模型适用于经历多种选择压力的大型生物和微生物系统,并为将群落构建过程纳入生态系统水平功能预测提供了一条途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb15/5226446/5d1e4ec82967/fmicb-07-01949-g001.jpg

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