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两种新物种的描述,即阿巴奇鞘氨醇单胞菌新种和潘尼鞘氨醇单胞菌新种

Description of two novel species, Sphingomonas abaci sp. nov. and Sphingomonas panni sp. nov.

作者信息

Busse Hans-Jürgen, Hauser Elke, Kämpfer Peter

机构信息

Institut für Bakteriologie, Mykologie und Hygiene, Veterinärmedizinische Universität, Veterinärplatz 1, A-1210 Vienna, Austria.

Institut für Angewandte Mikrobiologie, Justus-Liebig-Universität Giessen, D-35392 Giessen, Germany.

出版信息

Int J Syst Evol Microbiol. 2005 Nov;55(Pt 6):2565-2569. doi: 10.1099/ijs.0.63872-0.

Abstract

Two Gram-negative, rod-shaped, non-spore-forming bacterial strains designated C42T and C52T were isolated in the Medical Clinic for Small Animals and Ungulates at the University for Veterinary Medicine Vienna, Austria. On the basis of 16S rRNA gene sequence similarity, both strains were shown to belong to the genus Sphingomonas. Strain C42T showed the greatest levels of sequence similarity with Sphingomonas melonis DSM 14444T and Sphingomonas aquatilis KCTC 2881T (both 97.7 %). Strain C52T showed the greatest levels of sequence similarity with Sphingomonas koreensis KCTC 2882T (97.2 %), Sphingomonas aquatilis KCTC 2881T (97.1 %) and S. melonis DSM 14444T (97.0 %). The presence of Q-10 as the main ubiquinone, the predominance of the compound sym-homospermidine in the polyamine patterns, the presence of a Sphingomonadaceae-specific sphingoglycolipid in the polar lipid patterns, the presence of the fatty acid 2-OH C(14 : 0) and the lack of 3-hydroxy fatty acids supported the identification of the two novel strains as members of the genus Sphingomonas sensu stricto. Unique physiological characteristics, protein patterns, quantitative differences in their fatty acid profiles and the results of genomic fingerprinting and DNA-DNA hybridizations differentiated strains C42T and C52T from closely related Sphingomonas species. Hence, the two strains are described as novel species of the genus Sphingomonas sensu stricto. The names Sphingomonas abaci sp. nov. (type strain C42T=LMG 21978T=DSM 15867T) and Sphingomonas panni sp. nov. (type strain C52T=LMG 21979(T)=DSM 15761T) are proposed.

摘要

在奥地利维也纳兽医大学的小动物和有蹄类动物医学诊所分离出两株革兰氏阴性、杆状、无芽孢形成的细菌菌株,分别命名为C42T和C52T。基于16S rRNA基因序列相似性,这两株菌株均被证明属于鞘氨醇单胞菌属。菌株C42T与甜瓜鞘氨醇单胞菌DSM 14444T和水生鞘氨醇单胞菌KCTC 2881T的序列相似性最高(均为97.7%)。菌株C52T与韩国鞘氨醇单胞菌KCTC 2882T(97.2%)、水生鞘氨醇单胞菌KCTC 2881T(97.1%)和甜瓜鞘氨醇单胞菌DSM 14444T(97.0%)的序列相似性最高。以Q-10作为主要泛醌,在多胺模式中化合物sym-高亚精胺占优势,在极性脂质模式中存在鞘氨醇单胞菌科特异性鞘糖脂,存在脂肪酸2-OH C(14 : 0)且缺乏3-羟基脂肪酸,支持将这两株新菌株鉴定为狭义鞘氨醇单胞菌属的成员。独特的生理特征、蛋白质模式、脂肪酸谱的定量差异以及基因组指纹图谱和DNA-DNA杂交结果将菌株C42T和C52T与密切相关的鞘氨醇单胞菌属物种区分开来。因此,这两株菌株被描述为狭义鞘氨醇单胞菌属的新物种。提议将其命名为嗜蚜鞘氨醇单胞菌(Sphingomonas abaci)新种(模式菌株C42T = LMG 21978T = DSM 15867T)和泛栖鞘氨醇单胞菌(Sphingomonas panni)新种(模式菌株C52T = LMG 21979(T) = DSM 15761T)。

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