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参与铁硫簇生物合成的大肠杆菌SufA的晶体结构:对功能性二聚体的启示

Crystal structure of Escherichia coli SufA involved in biosynthesis of iron-sulfur clusters: implications for a functional dimer.

作者信息

Wada Kei, Hasegawa Yuko, Gong Zhao, Minami Yoshiko, Fukuyama Keiichi, Takahashi Yasuhiro

机构信息

Department of Biology, Graduate School of Science, Osaka University, 1-1 Machikaneyama, Toyonaka, Osaka 560-0043, Japan.

出版信息

FEBS Lett. 2005 Dec 5;579(29):6543-8. doi: 10.1016/j.febslet.2005.10.046. Epub 2005 Nov 15.

Abstract

IscA and SufA are paralogous proteins that play crucial roles in the biosynthesis of Fe-S clusters, perhaps through a mechanism involving transient Fe-S cluster formation. We have determined the crystal structure of E. coli SufA at 2.7A resolution. SufA exists as a homodimer, in contrast to the tetrameric organization of IscA. Furthermore, a C-terminal segment containing two essential cysteine residues (Cys-Gly-Cys), which is disordered in the IscA structure, is clearly visible in one molecule (the alpha1 subunit) of the SufA homodimer. Although this segment is disordered in the other molecule (the alpha2 subunit), computer modeling of this segment based on the well-defined conformation of alpha1 subunit suggests that the four cysteine residues (Cys114 and Cys116 in each subunit) in the Cys-Gly-Cys motif are positioned in close proximity at the dimer interface. The arrangement of these cysteines together with the nearby Glu118 in SufA dimer may allow coordination of an Fe-S cluster and/or an Fe atom.

摘要

IscA和SufA是旁系同源蛋白,在铁硫簇的生物合成中发挥关键作用,可能是通过一种涉及瞬时铁硫簇形成的机制。我们已确定大肠杆菌SufA在2.7埃分辨率下的晶体结构。与IscA的四聚体结构不同,SufA以同型二聚体形式存在。此外,在IscA结构中无序的包含两个必需半胱氨酸残基(Cys-Gly-Cys)的C末端片段,在SufA同型二聚体的一个分子(α1亚基)中清晰可见。尽管该片段在另一个分子(α2亚基)中无序,但基于α1亚基明确的构象对该片段进行计算机建模表明,Cys-Gly-Cys基序中的四个半胱氨酸残基(每个亚基中的Cys114和Cys116)在二聚体界面处紧密相邻。这些半胱氨酸与SufA二聚体中附近的Glu118一起的排列可能允许铁硫簇和/或铁原子的配位。

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