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基于细胞外聚合物基质酶解破坏的生物膜控制策略——一项建模研究。

Biofilm-control strategies based on enzymic disruption of the extracellular polymeric substance matrix--a modelling study.

作者信息

Xavier Joao B, Picioreanu Cristian, Rani Suriani Abdul, van Loosdrecht Mark C M, Stewart Philip S

机构信息

Department of Biotechnology, Delft University of Technology, Julianalaan 67, 2628 BC Delft, The Netherlands.

Center for Biofilm Engineering and Department of Chemical and Biological Engineering, Montana State University-Bozeman, Bozeman, MT 59717-3980, USA.

出版信息

Microbiology (Reading). 2005 Dec;151(Pt 12):3817-3832. doi: 10.1099/mic.0.28165-0.

Abstract

A kinetic model is proposed to assess the feasibility of strategies for the removal of biofilms by using substances that induce detachment by affecting the cohesiveness of the matrix of extracellular polymeric substances (EPSs). The model uses a two-state description of the EPS (natural EPS and compromised EPS) to provide a unified representation of diverse mechanisms of action of detachment-promoting agents (DPAs), which include enzymes that degrade the EPS and other agents described in the literature. A biofilm-cohesiveness factor describes local increases in detachment rates resultant from losses in cohesive strength. The kinetic model was implemented in an individual-based biofilm-modelling framework, including detachment rates dependent on local cohesiveness. The efficacy of treatments with DPAs was assessed by three-dimensional model simulations. Changes in treatment efficacy were evaluated quantitatively by using a Thiele modulus, which quantifies the relationship between diffusion of the DPA through the biofilm matrix and DPA decay rate, and a Damköhler number relating the rate of EPS reaction with a DPA and the rate of EPS production by the micro-organisms in the biofilm. This study demonstrates the feasibility and limits of implementing biofilm-control strategies based on attacking the EPS.

摘要

提出了一种动力学模型,以评估使用通过影响细胞外聚合物(EPS)基质的内聚性来诱导脱落的物质去除生物膜策略的可行性。该模型使用EPS的两种状态描述(天然EPS和受损EPS),以统一表示促进脱落剂(DPA)的多种作用机制,其中包括降解EPS的酶和文献中描述的其他试剂。生物膜内聚性因子描述了由于内聚强度损失导致的局部脱落率增加。动力学模型是在基于个体的生物膜建模框架中实现的,包括依赖于局部内聚性的脱落率。通过三维模型模拟评估了DPA处理的效果。使用蒂勒模数定量评估处理效果的变化,该模数量化了DPA通过生物膜基质的扩散与DPA衰减率之间的关系,以及达姆科勒数,该数将EPS与DPA的反应速率与生物膜中微生物产生EPS的速率相关联。本研究证明了基于攻击EPS实施生物膜控制策略的可行性和局限性。

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