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蛋白质水化层中跨水网络的热破坏

Thermal breaking of spanning water networks in the hydration shell of proteins.

作者信息

Brovchenko I, Krukau A, Smolin N, Oleinikova A, Geiger A, Winter R

机构信息

Physical Chemistry, University of Dortmund, Otto-Hahn-Strasse 6, Dortmund D-44227, Germany.

出版信息

J Chem Phys. 2005 Dec 8;123(22):224905. doi: 10.1063/1.2121708.

Abstract

The presence of a spanning hydrogen-bonded network of water at the surface of biomolecules is important for their conformational stability, dynamics, and function. We have studied by computer simulations the clustering and percolation of water in the hydration shell of a small elastinlike peptide (ELP) and the medium-size protein staphylococcal nuclease (SNase), in aqueous solution. We have found that in both systems a spanning network of hydration water exists at low temperatures and breaks up with increasing temperature via a quasi-two-dimensional percolation transition. The thermal breaking of the spanning water network occurs at biologically relevant temperatures, in the temperature range, which is close to the temperature of the "inverse temperature transition" of ELP and the unfolding temperature of SNase, respectively.

摘要

生物分子表面存在跨越氢键的水网络对其构象稳定性、动力学和功能很重要。我们通过计算机模拟研究了水溶液中小的类弹性蛋白肽(ELP)和中等大小的蛋白质葡萄球菌核酸酶(SNase)水化壳中水的聚集和渗滤。我们发现,在这两个系统中,低温下存在跨越的水化水网络,并且随着温度升高,通过准二维渗滤转变而破裂。跨越水网络的热破裂发生在生物学相关温度下,该温度范围分别接近ELP的“逆温度转变”温度和SNase的解折叠温度。

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