• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

低力DNA凝聚和不连续高力解凝聚揭示了蛋白质Fis的环稳定功能。

Low-force DNA condensation and discontinuous high-force decondensation reveal a loop-stabilizing function of the protein Fis.

作者信息

Skoko Dunja, Yan Jie, Johnson Reid C, Marko John F

机构信息

Department of Physics, University of Illinois at Chicago, 845 West Taylor Street, Chicago, Illinois 60607-7059, USA.

出版信息

Phys Rev Lett. 2005 Nov 11;95(20):208101. doi: 10.1103/PhysRevLett.95.208101. Epub 2005 Nov 8.

DOI:10.1103/PhysRevLett.95.208101
PMID:16384101
Abstract

We report single-DNA-stretching experiments showing that the protein Fis, an abundant bacterial chromosome protein of E. coli, mediates a dramatic DNA condensation to zero length. This condensation occurs abruptly when DNA tension is reduced below a protein-concentration-dependent threshold f* < 1 pN. Following condensation, reopening under larger forces proceeds via a series of discrete jumps, indicating that Fis is able to stabilize DNA crossings. Our experiments suggest that Fis may play a role in vivo stabilizing the "loop-domain" structure of the bacterial chromosome.

摘要

我们报告了单DNA拉伸实验,结果表明蛋白质Fis(一种大肠杆菌中丰富的细菌染色体蛋白)介导了DNA急剧浓缩至零长度。当DNA张力降低到低于蛋白质浓度依赖性阈值f*<1皮牛时,这种浓缩会突然发生。浓缩后,在更大的力作用下重新打开是通过一系列离散的跳跃进行的,这表明Fis能够稳定DNA交叉。我们的实验表明,Fis可能在体内对细菌染色体的“环域”结构起到稳定作用。

相似文献

1
Low-force DNA condensation and discontinuous high-force decondensation reveal a loop-stabilizing function of the protein Fis.低力DNA凝聚和不连续高力解凝聚揭示了蛋白质Fis的环稳定功能。
Phys Rev Lett. 2005 Nov 11;95(20):208101. doi: 10.1103/PhysRevLett.95.208101. Epub 2005 Nov 8.
2
Mechanism of chromosome compaction and looping by the Escherichia coli nucleoid protein Fis.大肠杆菌类核蛋白Fis介导染色体压缩和环化的机制
J Mol Biol. 2006 Dec 8;364(4):777-98. doi: 10.1016/j.jmb.2006.09.043. Epub 2006 Sep 22.
3
Facilitated Dissociation of a Nucleoid Protein from the Bacterial Chromosome.类核蛋白从细菌染色体上的易化解离
J Bacteriol. 2016 May 27;198(12):1735-42. doi: 10.1128/JB.00225-16. Print 2016 Jun 15.
4
Force-driven unbinding of proteins HU and Fis from DNA quantified using a thermodynamic Maxwell relation.使用热力学麦克斯韦关系定量测量 HU 和 Fis 蛋白与 DNA 的力驱动解结合。
Nucleic Acids Res. 2011 Jul;39(13):5568-77. doi: 10.1093/nar/gkr141. Epub 2011 Mar 22.
5
Dynamic state of DNA topology is essential for genome condensation in bacteria.DNA拓扑结构的动态状态对于细菌中的基因组凝聚至关重要。
EMBO J. 2006 Nov 29;25(23):5591-602. doi: 10.1038/sj.emboj.7601414. Epub 2006 Nov 9.
6
Structure of the Escherichia coli Fis-DNA complex probed by protein conjugated with 1,10-phenanthroline copper(I) complex.通过与1,10 - 菲咯啉铜(I)配合物偶联的蛋白质探测大肠杆菌Fis-DNA复合物的结构。
Proc Natl Acad Sci U S A. 1994 Mar 1;91(5):1721-5. doi: 10.1073/pnas.91.5.1721.
7
FIS modulates growth phase-dependent topological transitions of DNA in Escherichia coli.FIS调节大肠杆菌中DNA的生长阶段依赖性拓扑转变。
Mol Microbiol. 1997 Nov;26(3):519-30. doi: 10.1046/j.1365-2958.1997.5951971.x.
8
Escherichia coli host factor for site-specific DNA inversion: cloning and characterization of the fis gene.大肠杆菌位点特异性DNA倒位的宿主因子:fis基因的克隆与特性分析
Proc Natl Acad Sci U S A. 1988 Jun;85(12):4237-41. doi: 10.1073/pnas.85.12.4237.
9
The FIS protein binds and bends the origin of chromosomal DNA replication, oriC, of Escherichia coli.FIS蛋白可结合并使大肠杆菌染色体DNA复制起点oriC弯曲。
Nucleic Acids Res. 1991 Aug 11;19(15):4167-72. doi: 10.1093/nar/19.15.4167.
10
FIS activates glnAp2 in Escherichia coli: role of a DNA bend centered at -55, upstream of the transcription start site.FIS在大肠杆菌中激活glnAp2:转录起始位点上游-55处为中心的DNA弯曲的作用。
FEMS Microbiol Lett. 2006 Apr;257(1):99-105. doi: 10.1111/j.1574-6968.2006.00150.x.

引用本文的文献

1
Single-molecule characterization of target search dynamics of DNA-binding proteins in DNA-condensed droplets.在 DNA 凝聚液滴中对 DNA 结合蛋白的靶标搜索动力学进行单分子表征。
Nucleic Acids Res. 2023 Jul 21;51(13):6654-6667. doi: 10.1093/nar/gkad471.
2
Cisplatin fastens chromatin irreversibly even at a high chloride concentration.顺铂即使在高浓度的氯离子存在下也能使染色质不可逆地固定。
Nucleic Acids Res. 2021 Dec 2;49(21):12035-12047. doi: 10.1093/nar/gkab922.
3
Single-molecule measurements reveal that PARP1 condenses DNA by loop stabilization.
单分子测量显示,PARP1 通过环稳定化来浓缩 DNA。
Sci Adv. 2021 Aug 11;7(33). doi: 10.1126/sciadv.abf3641. Print 2021 Aug.
4
Architecture of the Escherichia coli nucleoid.大肠杆菌核区的结构。
PLoS Genet. 2019 Dec 12;15(12):e1008456. doi: 10.1371/journal.pgen.1008456. eCollection 2019 Dec.
5
Force-Dependent Facilitated Dissociation Can Generate Protein-DNA Catch Bonds.力依赖促进解离可产生蛋白-DNA 捕获键。
Biophys J. 2019 Sep 17;117(6):1085-1100. doi: 10.1016/j.bpj.2019.07.044. Epub 2019 Aug 2.
6
Organization of DNA in Mammalian Mitochondria.哺乳动物线粒体中的 DNA 组织。
Int J Mol Sci. 2019 Jun 5;20(11):2770. doi: 10.3390/ijms20112770.
7
Regulation of Bacterial DNA Packaging in Early Stationary Phase by Competitive DNA Binding of Dps and IHF.Dps与IHF竞争性DNA结合对细菌早期稳定期DNA包装的调控
Sci Rep. 2015 Dec 14;5:18146. doi: 10.1038/srep18146.
8
Site-specific DNA Inversion by Serine Recombinases.丝氨酸重组酶介导的位点特异性DNA倒位
Microbiol Spectr. 2015 Feb 19;3(3):1-36. doi: 10.1128/microbiolspec.MDNA3-0047-2014.
9
Specific and non-specific interactions of ParB with DNA: implications for chromosome segregation.ParB与DNA的特异性和非特异性相互作用:对染色体分离的影响
Nucleic Acids Res. 2015 Jan;43(2):719-31. doi: 10.1093/nar/gku1295. Epub 2015 Jan 8.
10
Biophysics of protein-DNA interactions and chromosome organization.蛋白质-DNA相互作用与染色体组织的生物物理学
Physica A. 2015 Jan 15;418:126-153. doi: 10.1016/j.physa.2014.07.045.