Ara Ismet, Kudo Takuji
Japan Collection of Microorganisms, RIKEN BioResource Center, 2-1 Hirosawa, Wako, Saitama 351-0198, Japan.
Int J Syst Evol Microbiol. 2006 Feb;56(Pt 2):393-400. doi: 10.1099/ijs.0.63862-0.
Three Gram-positive, aerobic, non-motile, mesophilic strains, designated 2-25(1)T, 2-29(17)T and 2-70(23)T, were isolated from sandy soil from Chokoria, Cox's Bazar, Bangladesh. The organisms produce short chains of non-motile spores that emerge singly or in tufts from vegetative hyphae on the surface of agar media. A comparative phylogenetic analysis based on 16S rRNA gene sequences indicated that the isolates formed a distinct clade within the evolutionary radiation of the family Micromonosporaceae and clustered with members of the genus Catellatospora. The nearest neighbours were Catellatospora citrea subsp. citrea and C. citrea subsp. methionotrophica. Chemotaxonomic data, such as the presence of meso- and 3-hydroxy-diaminopimelic acids, N-glycolyl type muramic acid, arabinose and xylose and glucose in whole-cell hydrolysates, phosphatidylethanolamine as a diagnostic phospholipid, a tetrahydrogenated menaquinone with 9 isoprene units as a major menaquinone and fatty acid profiles predominated by iso-branched hexadecanoic acid and iso-branched pentadecanoic acid, supported the affiliation of the novel isolates to the genus Catellatospora. The results of DNA-DNA hybridization and physiological and biochemical tests allowed the novel isolates to be differentiated genotypically and phenotypically from the three recognized Catellatospora species. The three isolates therefore represent novel species for which the names Catellatospora chokoriensis sp. nov. [type strain 2-25(1)T=JCM 12950T=DSM 44900T], Catellatospora coxensis sp. nov. [type strain 2-29(17)T=JCM 12951T=DSM 44901T] and Catellatospora bangladeshensis sp. nov. [type strain 2-70(23)T=JCM 12949T=DSM 44899T], are proposed. DNA-DNA hybridization tests with C. citrea subsp. citrea and C. citrea subsp. methionotrophica, in combination with chemotaxonomic and physiological data, demonstrated that C. citrea subsp. methionotrophica should be elevated to a separate species for which the name Catellatospora methionotrophica sp. nov., comb. nov. is proposed (type strain JCM 7543T=DSM 44098T).
从孟加拉国科克斯巴扎尔乔科里亚的沙地土壤中分离出三株革兰氏阳性、需氧、不运动、嗜温菌株,分别命名为2-25(1)T、2-29(17)T和2-70(23)T。这些微生物产生不运动的孢子短链,单个或成簇地从琼脂培养基表面的营养菌丝中长出。基于16S rRNA基因序列的比较系统发育分析表明,这些分离株在小单孢菌科的进化辐射范围内形成了一个独特的分支,并与卡特拉孢菌属的成员聚类。最近的亲缘种是柠檬卡特拉孢菌柠檬亚种和柠檬卡特拉孢菌甲硫营养亚种。化学分类学数据,如全细胞水解物中内消旋和3-羟基二氨基庚二酸、N-糖基型 muramic 酸、阿拉伯糖、木糖和葡萄糖的存在,磷脂酰乙醇胺作为诊断性磷脂,具有9个异戊二烯单元的四氢化甲萘醌作为主要甲萘醌,以及以异分支十六烷酸和异分支十五烷酸为主的脂肪酸谱,支持了新分离株与卡特拉孢菌属的亲缘关系。DNA-DNA杂交以及生理生化测试结果使新分离株在基因型和表型上与三个已确认的卡特拉孢菌物种区分开来。因此,这三株分离株代表了新物种,分别命名为乔科里亚卡特拉孢菌新种[模式菌株2-25(1)T = JCM 12950T = DSM 44900T]、科克斯卡特拉孢菌新种[模式菌株2-29(17)T = JCM 12951T = DSM 44901T]和孟加拉卡特拉孢菌新种[模式菌株2-70(23)T = JCM 12949T = DSM 44899T]。与柠檬卡特拉孢菌柠檬亚种和柠檬卡特拉孢菌甲硫营养亚种的DNA-DNA杂交试验,结合化学分类学和生理学数据,表明柠檬卡特拉孢菌甲硫营养亚种应提升为一个单独的物种,命名为甲硫营养卡特拉孢菌新种,新组合(模式菌株JCM 7543T = DSM 44098T)。