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通过 2'-磷酸单酯、3',5'-磷酸二酯键将内源性 tRNA 3' 半分子连接到其相应的 5' 半分子,在衣藻提取物中。

Ligation of endogenous tRNA 3' half molecules to their corresponding 5' halves via 2'-phosphomonoester,3',5'-phosphodiester bonds in extracts of Chlamydomonas.

机构信息

Institut für Biochemie, Universität Würzburg, Röntgenring 11, D-8700 Würzburg, FRG.

出版信息

EMBO J. 1983;2(4):605-10. doi: 10.1002/j.1460-2075.1983.tb01470.x.

DOI:10.1002/j.1460-2075.1983.tb01470.x
PMID:16453445
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC555068/
Abstract

tRNA preparations from Chlamydomonas and wheat germ contain small amounts of tRNA 5' halves and corresponding 3' halves. Incubation of cell-free extracts from the two sources with [gamma-P]ATP yielded 5'-P-labeled tRNA 3' halves which were joined to their corresponding 5' counterparts to form mature tRNA containing 2'-phosphomonoester,3', 5'-phosphodiester bonds. tRNA 3' halves labelled with T4 kinase were purified, sequenced and also joined to their 5' counterparts. It is proposed that these tRNA halves may be intermediates of the tRNA splicing process, and that the RNA kinase and ligase activities observed here are part of the tRNA splicing complex.

摘要

来自衣藻和麦胚的 tRNA 制剂含有少量的 tRNA 5' 片段和相应的 3' 片段。用 [γ-P]ATP 孵育这两种来源的无细胞提取物,得到了 5'-P 标记的 tRNA 3' 片段,这些片段与相应的 5' 片段连接,形成含有 2'-磷酸单酯、3'、5'-磷酸二酯键的成熟 tRNA。用 T4 激酶标记的 tRNA 3' 片段被纯化、测序,并与它们的 5' 片段连接。据推测,这些 tRNA 片段可能是 tRNA 剪接过程的中间产物,并且这里观察到的 RNA 激酶和连接酶活性是 tRNA 剪接复合物的一部分。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/39128ac4c1bc/emboj00257-0123-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/694db8336037/emboj00257-0121-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/cde2edf0b770/emboj00257-0121-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/0a6b2715bd27/emboj00257-0122-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/5e511ac180d6/emboj00257-0123-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/0c9463fb2fcb/emboj00257-0123-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/39128ac4c1bc/emboj00257-0123-c.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/694db8336037/emboj00257-0121-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/cde2edf0b770/emboj00257-0121-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/0a6b2715bd27/emboj00257-0122-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/5e511ac180d6/emboj00257-0123-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/0c9463fb2fcb/emboj00257-0123-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2677/555068/39128ac4c1bc/emboj00257-0123-c.jpg

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本文引用的文献

1
Cell-free circularization of viroid progeny RNA by an RNA ligase from wheat germ.小麦胚 RNA 连接酶对类病毒前体 RNA 的无细胞环化作用。
Science. 1982 Sep 17;217(4565):1147-9. doi: 10.1126/science.217.4565.1147.
2
DNA sequence analysis: a general, simple and rapid method for sequencing large oligodeoxyribonucleotide fragments by mapping.DNA序列分析:一种通过图谱对大的寡脱氧核糖核苷酸片段进行测序的通用、简单且快速的方法。
Nucleic Acids Res. 1974 Mar;1(3):331-53. doi: 10.1093/nar/1.3.331.
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Formation of a 2'-phosphomonoester, 3',5'-phosphodiester linkage by a novel RNA ligase in wheat germ.
EMBO J. 1984 May;3(5):1091-6. doi: 10.1002/j.1460-2075.1984.tb01934.x.
4
UAG readthrough during TMV RNA translation: isolation and sequence of two tRNAs with suppressor activity from tobacco plants.TMV RNA 翻译中的 UAG 通读:从烟草植物中分离和测序两种具有抑制活性的 tRNA。
EMBO J. 1984 Feb;3(2):351-6. doi: 10.1002/j.1460-2075.1984.tb01810.x.
5
Plant tRNA ligases are multifunctional enzymes that have diverged in sequence and substrate specificity from RNA ligases of other phylogenetic origins.植物tRNA连接酶是多功能酶,其在序列和底物特异性上与其他系统发育起源的RNA连接酶有所不同。
Nucleic Acids Res. 2005 Jan 14;33(1):388-99. doi: 10.1093/nar/gki174. Print 2005.
6
Junction phosphate is derived from the precursor in the tRNA spliced by the archaeon Haloferax volcanii cell extract.连接磷酸是由嗜盐嗜碱古菌沃氏嗜盐菌细胞提取物剪接的tRNA前体衍生而来。
RNA. 2000 Jul;6(7):1019-30. doi: 10.1017/s1355838200000613.
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A cell-free plant extract for accurate pre-tRNA processing, splicing and modification.一种用于精确进行前体tRNA加工、剪接和修饰的无细胞植物提取物。
EMBO J. 1987 Sep;6(9):2811-8. doi: 10.1002/j.1460-2075.1987.tb02577.x.
8
A human and a plant intron-containing tRNATyr gene are both transcribed in a HeLa cell extract but spliced along different pathways.一个人类和一个含有内含子的植物tRNATyr基因在HeLa细胞提取物中均被转录,但沿着不同的途径进行剪接。
EMBO J. 1987 Jan;6(1):35-41. doi: 10.1002/j.1460-2075.1987.tb04715.x.
9
Common structural features of the genes for two stable RNAs from Halobacterium halobium.嗜盐栖热菌两种稳定RNA基因的共同结构特征。
Nucleic Acids Res. 1985 Jan 11;13(1):31-43. doi: 10.1093/nar/13.1.31.
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4
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5
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Cell. 1981 Jan;23(1):89-93. doi: 10.1016/0092-8674(81)90273-7.
6
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J Mol Biol. 1981 Jan 15;145(2):405-20. doi: 10.1016/0022-2836(81)90212-6.
7
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9
Rapid cataloging of ribonuclease T1 resistant oligonucleotides from ribosomal RNAs for phylogenetic studies.用于系统发育研究的核糖体RNA中核糖核酸酶T1抗性寡核苷酸的快速编目。
J Mol Evol. 1981;17(4):227-36. doi: 10.1007/BF01732760.
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Ribonuclease "XlaI," an activity from Xenopus laevis oocytes that excises intervening sequences from yeast transfer ribonucleic acid precursors.核糖核酸酶“XlaI”,一种来自非洲爪蟾卵母细胞的活性物质,可从酵母转移核糖核酸前体中切除间隔序列。
Mol Cell Biol. 1981 Mar;1(3):269-80. doi: 10.1128/mcb.1.3.269-280.1981.