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通过聚合酶链反应检测B组和C组轮状病毒。

Detection of group B and C rotaviruses by polymerase chain reaction.

作者信息

Gouvea V, Allen J R, Glass R I, Fang Z Y, Bremont M, Cohen J, McCrae M A, Saif L J, Sinarachatanant P, Caul E O

机构信息

Division of Viral and Rickettsial Diseases, Centers for Disease Control, Atlanta, Georgia 30333.

出版信息

J Clin Microbiol. 1991 Mar;29(3):519-23. doi: 10.1128/jcm.29.3.519-523.1991.

DOI:10.1128/jcm.29.3.519-523.1991
PMID:1645368
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC269811/
Abstract

We adapted the polymerase chain reaction (PCR) to detect the noncultivatable group B and C rotaviruses and introduced a simple and convenient technique to purify viral RNA from stool specimens. Double-stranded RNA present in stool extracts was purified by adsorption to hydroxyapatite and was used as the template for reverse transcription and polymerase amplification. Primer pairs specific for group B (gene 8) and group C (gene 6) rotaviruses were selected to amplify group-characteristic sizes of cDNA copies readily identifiable in ethidium bromide-stained agarose gels. These primer pairs were used separately in individual PCR assays or were pooled with a primer pair specific for group A rotavirus (gene 9) in a combined PCR assay for the simultaneous detection of all three rotavirus groups. The method was very sensitive and was used to identify both human and porcine strains of group B and C rotaviruses in stool specimens. A second PCR amplification with internal group-specific primers served to increase further the sensitivity of the test and to confirm the diagnostic results obtained in the first amplification.

摘要

我们采用聚合酶链反应(PCR)来检测不可培养的B组和C组轮状病毒,并引入了一种简单便捷的技术从粪便标本中纯化病毒RNA。粪便提取物中存在的双链RNA通过吸附到羟基磷灰石上进行纯化,并用作逆转录和聚合酶扩增的模板。选择针对B组(基因8)和C组(基因6)轮状病毒的引物对,以扩增在溴化乙锭染色的琼脂糖凝胶中易于识别的cDNA拷贝的组特征大小。这些引物对分别用于单独的PCR检测中,或与针对A组轮状病毒(基因9)的引物对合并用于联合PCR检测,以同时检测所有三个轮状病毒组。该方法非常灵敏,用于鉴定粪便标本中B组和C组轮状病毒的人源和猪源毒株。使用内部组特异性引物进行的第二次PCR扩增进一步提高了检测的灵敏度,并确认了第一次扩增中获得的诊断结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a2d/269811/595f289bfdbb/jcm00039-0122-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a2d/269811/511539af29e1/jcm00039-0121-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a2d/269811/7c7e69e24dfc/jcm00039-0121-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a2d/269811/595f289bfdbb/jcm00039-0122-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a2d/269811/511539af29e1/jcm00039-0121-a.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a2d/269811/7c7e69e24dfc/jcm00039-0121-b.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2a2d/269811/595f289bfdbb/jcm00039-0122-a.jpg

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