Choo Hyunah, Chen Xin, Yadav Vikas, Wang Jianing, Schinazi Raymond F, Chu Chung K
College of Pharmacy, The University of Georgia, Athens, Georgia 30602, USA.
J Med Chem. 2006 Mar 9;49(5):1635-47. doi: 10.1021/jm050912h.
Various D- and L-thietanose nucleosides were synthesized from D- and L-xylose. The four-membered thietane ring was efficiently synthesized by the cyclization of 1-thioacetyl-3-mesylate (4/38) under basic conditions. Condensation with various heterocyclic bases was conducted via Pummerer-type rearrangement to afford various nucleoside derivatives. Among the synthesized nucleosides, D-uridine (23), D-cytidine (24), D-5-fluorocytidine (25), and L-cytidine (52) analogues showed moderate anti-HIV activity, with EC50 = 6.9, 1.3, 5.8, and 14.1 microM, respectively. However, these four nucleoside analogues are cytotoxic in peripheral blood mononuclear and CEM cells. The other nucleosides are neither active nor cytotoxic. Interestingly, the oxetanocin A analogue 33 was not active. Comparison of the minimized reverse transcriptases (RTs) complexed with the corresponding triphosphates of the cytidine analogue 24 and the adenosine analogue 33 by molecular modeling studies showed that there is no difference in the binding mode of the triphosphate of the cytidine analogue 24 to the active site of HIV-1 RT from that of the triphosphate of the adenosine analogue 33. Modeling studies on the initial monophosphorylation step by deoxycytidine kinase showed that the catalytic efficiency of phosphorylation through a nucleophilic attack of the 4'-hydroxyl group of thietanose on the gamma-phosphate of ATP is diminished in the case of L-cytidine analogue (52) due to the increased distance between the 4'-hydroxyl group and the gamma-phosphate.
从D-木糖和L-木糖合成了各种D-和L-硫代环戊糖核苷。通过1-硫代乙酰基-3-甲磺酸酯(4/38)在碱性条件下环化,高效合成了四元硫代环戊烷环。通过普默勒尔型重排与各种杂环碱进行缩合反应,得到了各种核苷衍生物。在合成的核苷中,D-尿苷(23)、D-胞苷(24)、D-5-氟胞苷(25)和L-胞苷(52)类似物显示出中等的抗HIV活性,EC50分别为6.9、1.3、5.8和14.1 microM。然而,这四种核苷类似物在外周血单核细胞和CEM细胞中具有细胞毒性。其他核苷既无活性也无细胞毒性。有趣的是,氧杂环丁烷A类似物33没有活性。通过分子模拟研究比较与胞苷类似物24和腺苷类似物33的相应三磷酸结合的最小化逆转录酶(RTs),结果表明,胞苷类似物24的三磷酸与HIV-1 RT活性位点的结合模式与腺苷类似物33的三磷酸没有差异。对脱氧胞苷激酶催化的初始单磷酸化步骤的模拟研究表明,由于硫代环戊糖4'-羟基与γ-磷酸之间的距离增加,L-胞苷类似物(52)通过硫代环戊糖4'-羟基对ATPγ-磷酸的亲核攻击进行磷酸化的催化效率降低。