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细胞色素c氧化酶亚基VIb的三个人类假基因的鉴定:基因进化的分子记录。

Identification of three human pseudogenes for subunit VIb of cytochrome c oxidase: a molecular record of gene evolution.

作者信息

Taanman J W, Schrage C, Reuvekamp P, Bijl J, Hartog M, de Vries H, Agsteribbe E

机构信息

Laboratory of Physiological Chemistry, University of Groningen, The Netherlands.

出版信息

Gene. 1991 Jun 30;102(2):237-44. doi: 10.1016/0378-1119(91)90083-n.

DOI:10.1016/0378-1119(91)90083-n
PMID:1651884
Abstract

Three pseudogenes for the nuclear-encoded subunit VIb of cytochrome c oxidase (COX) were isolated by screening a human genomic library with cloned human cDNA coding for COX subunit VIb. The nucleotide sequences of the pseudogenes, designated psi COX6b-1, psi COX6b-2 and psi COX6b-3, were determined. Pseudogene psi COX6b-1 bears all the hallmarks of a processed pseudogene and diverged from the parental gene after the divergence of man and cow. Alu repetitive elements were integrated into the structural sequences of the other two pseudogenes. Comparison with the human and bovine cDNA sequences encoding COX subunit VIb suggests that psi COX6b-2 and psi COX6b-3 were formed earlier in evolution than psi COX6b-1. Genomic Southern analysis indicated that a few more pseudogenes for COX subunit VIb are likely to be present in the human genome. Identical nt differences with respect to the human cDNA sequence in the pseudogenes provide some clues on the evolution of the ancestral gene coding for COX subunit VIb.

摘要

通过用编码细胞色素c氧化酶(COX)亚基VIb的克隆人cDNA筛选人基因组文库,分离出了COX核编码亚基VIb的三个假基因。确定了这些假基因的核苷酸序列,分别命名为psi COX6b - 1、psi COX6b - 2和psi COX6b - 3。假基因psi COX6b - 1具有加工假基因的所有特征,在人和牛分化之后从亲本基因分化而来。Alu重复元件整合到了另外两个假基因的结构序列中。与编码COX亚基VIb的人和牛cDNA序列比较表明,psi COX6b - 2和psi COX6b - 3在进化中比psi COX6b - 1形成得更早。基因组Southern分析表明,人基因组中可能还存在更多COX亚基VIb的假基因。假基因中相对于人cDNA序列相同的核苷酸差异为编码COX亚基VIb的祖先基因的进化提供了一些线索。

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Identification of three human pseudogenes for subunit VIb of cytochrome c oxidase: a molecular record of gene evolution.细胞色素c氧化酶亚基VIb的三个人类假基因的鉴定:基因进化的分子记录。
Gene. 1991 Jun 30;102(2):237-44. doi: 10.1016/0378-1119(91)90083-n.
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Structural organization and evolution of the liver isoform gene for bovine cytochrome c oxidase subunit VIIa.牛细胞色素c氧化酶亚基VIIa肝脏同工型基因的结构组织与进化
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A processed pseudogene with an intact coding sequence for rat liver cytochrome c oxidase subunit VIc.一种具有完整编码序列的大鼠肝脏细胞色素c氧化酶亚基VIc的加工假基因。
Gene. 1988 Jul 15;67(1):125-30. doi: 10.1016/0378-1119(88)90015-7.

引用本文的文献

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Cells. 2021 Jan 20;10(2):197. doi: 10.3390/cells10020197.
2
Subunit change in cytochrome c oxidase: identification of the oxygen switch in Dictyostelium.细胞色素c氧化酶的亚基变化:盘基网柄菌中氧开关的鉴定
EMBO J. 1997 Feb 17;16(4):739-49. doi: 10.1093/emboj/16.4.739.
3
Assignment of the gene coding for human cytochrome c oxidase subunit VIb to chromosome 19, band q13.1, by fluorescence in situ hybridisation.
通过荧光原位杂交将编码人细胞色素c氧化酶亚基VIb的基因定位于19号染色体q13.1带。
Hum Genet. 1991 Jul;87(3):325-7. doi: 10.1007/BF00200913.