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黑猩猩假基因在人类细胞色素c氧化酶亚基IV染色体定位中的新应用。

Novel use of a chimpanzee pseudogene for chromosomal mapping of human cytochrome c oxidase subunit IV.

作者信息

Lomax M I, Welch M D, Darras B T, Francke U, Grossman L I

机构信息

Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor 48109.

出版信息

Gene. 1990 Feb 14;86(2):209-16. doi: 10.1016/0378-1119(90)90281-u.

DOI:10.1016/0378-1119(90)90281-u
PMID:2157630
Abstract

We have isolated a chimpanzee processed pseudogene for subunit IV of cytochrome c oxidase (COX; EC 1.9.3.1) by screening a chimpanzee genomic library in lambda Charon 32 with a bovine liver cDNA encoding COX subunit IV (COX IV), and localized it to a 1.9-kb HindIII fragment. Southern-blot analysis of genomic DNA from five primates showed that DNAs from human, gorilla, and chimpanzee each contained the 1.9-kb pseudogene fragment, whereas orangutan and pigtail macaque monkey DNA did not. This result clearly indicates that the pseudogene arose before the divergence of the chimpanzee and gorilla from the primate lineage. By screening Chinese hamster x human hybrid panels with the human COX4 cDNA, we have mapped COX4 genes to two human chromosomes, 14 and 16. The 1.9-kb HindIII fragment containing the pseudogene, COX4P1, can be assigned to chromosome 14, and by means of rearranged chromosomes in somatic cell hybrids, to 14q21-qter. Similarly, the functional gene, COX4, has been mapped to 16q22-qter.

摘要

我们通过用编码细胞色素c氧化酶亚基IV(COX;EC 1.9.3.1)的牛肝cDNA筛选λ噬菌体Charon 32中的黑猩猩基因组文库,分离出了一个黑猩猩加工的细胞色素c氧化酶亚基IV假基因,并将其定位到一个1.9kb的HindIII片段上。对五种灵长类动物基因组DNA的Southern印迹分析表明,人类、大猩猩和黑猩猩的DNA均含有1.9kb的假基因片段,而猩猩和猪尾猕猴的DNA则没有。这一结果清楚地表明,该假基因在黑猩猩和大猩猩从灵长类谱系分化之前就已出现。通过用人COX4 cDNA筛选中国仓鼠×人类杂种细胞系,我们已将COX4基因定位到人类的两条染色体14和16上。含有假基因COX4P1的1.9kb HindIII片段可定位于染色体14,并通过体细胞杂种中的重排染色体定位于14q21-qter。同样,功能基因COX4已被定位到16q22-qter。

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1
Novel use of a chimpanzee pseudogene for chromosomal mapping of human cytochrome c oxidase subunit IV.黑猩猩假基因在人类细胞色素c氧化酶亚基IV染色体定位中的新应用。
Gene. 1990 Feb 14;86(2):209-16. doi: 10.1016/0378-1119(90)90281-u.
2
Rapid evolution of the human gene for cytochrome c oxidase subunit IV.细胞色素c氧化酶亚基IV的人类基因的快速进化。
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Cloning, characterization, and chromosomal localization of human liver form cytochrome c oxidase subunit VIa related genes.人类肝脏型细胞色素c氧化酶亚基VIa相关基因的克隆、表征及染色体定位
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Structure of the human cytochrome c oxidase subunit Vb gene and chromosomal mapping of the coding gene and of seven pseudogenes.人类细胞色素c氧化酶亚基Vb基因的结构以及编码基因和七个假基因的染色体定位
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Identification of three human pseudogenes for subunit VIb of cytochrome c oxidase: a molecular record of gene evolution.细胞色素c氧化酶亚基VIb的三个人类假基因的鉴定:基因进化的分子记录。
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Chromosomal evolution of the PKD1 gene family in primates.灵长类动物中PKD1基因家族的染色体进化
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Structure of the human gene (COX6A2) for the heart/muscle isoform of cytochrome c oxidase subunit VIa and its chromosomal location in humans, mice, and cattle.细胞色素c氧化酶亚基VIa心脏/肌肉同工型的人类基因(COX6A2)的结构及其在人类、小鼠和牛中的染色体定位。
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A processed pseudogene with an intact coding sequence for rat liver cytochrome c oxidase subunit VIc.一种具有完整编码序列的大鼠肝脏细胞色素c氧化酶亚基VIc的加工假基因。
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