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在研究生培训项目中弥合生物信息学与临床信息学之间的差距。

Bridging the gap between biological and clinical informatics in a graduate training program.

作者信息

Johnson Stephen B, Friedman Richard A

机构信息

Department of Biomedical Informatics, Columbia University, USA.

出版信息

J Biomed Inform. 2007 Feb;40(1):59-66. doi: 10.1016/j.jbi.2006.02.011. Epub 2006 Mar 15.

Abstract

Several training programs in biomedical informatics in the United States are attempting to integrate biological and clinical informatics. However, significant differences in the cultures underlying these two disciplines pose barriers to a uniform educational solution. This paper recounts the experience at Columbia University in adapting a graduate program with an initial focus on clinical informatics to train bioinformaticians. The analysis begins by considering the development of the medical and biological informatics cultures over a 17-year period. Then we review how two separate curricula evolved to serve the needs of each group. Interviews with bioinformatics students and faculty indicated some dissatisfaction with the curriculum that developed within clinical informatics. Their comments are considered in the light of an analysis of the relationship between the application domains of biomedical informatics as a discipline. In response, a new curriculum was developed in which bioinformatics and clinical informatics are regarded as subdivisions of the same subject. A key feature of this curriculum is a new course, Theory and Methods in Biomedical Informatics, which presents informatics principles in their general form, and illustrates their application with examples drawn from across the biomedical spectrum. The paper concludes with suggestions for integrating informatics training programs at other institutions.

摘要

美国的几个生物医学信息学培训项目正试图将生物信息学与临床信息学整合起来。然而,这两个学科背后的文化存在显著差异,这对统一的教育解决方案构成了障碍。本文讲述了哥伦比亚大学调整一个最初专注于临床信息学的研究生项目以培养生物信息学家的经历。分析首先考虑了17年间医学和生物信息学文化的发展。然后我们回顾了两个独立的课程是如何演变以满足各自群体需求的。对生物信息学学生和教师的访谈表明,他们对临床信息学领域内发展起来的课程有些不满。根据对生物医学信息学作为一门学科的应用领域之间关系的分析,对他们的意见进行了考量。作为回应,开发了一门新的课程,其中生物信息学和临床信息学被视为同一学科的细分领域。该课程的一个关键特点是一门新课程,即生物医学信息学理论与方法,它以一般形式呈现信息学原理,并通过从整个生物医学领域选取的例子来说明其应用。本文最后对其他机构整合信息学培训项目提出了建议。

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