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果蝇X染色体远端部分的分子群体遗传学:黄-achaete区域遗传搭便车的证据。

Molecular population genetics of the distal portion of the X chromosome in Drosophila: evidence for genetic hitchhiking of the yellow-achaete region.

作者信息

Begun D J, Aquadro C F

机构信息

Section of Genetics and Development, Cornell University, Ithaca, New York 14853.

出版信息

Genetics. 1991 Dec;129(4):1147-58. doi: 10.1093/genetics/129.4.1147.

DOI:10.1093/genetics/129.4.1147
PMID:1664405
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC1204778/
Abstract

We have estimated DNA sequence variation and differentiation within and between Drosophila melanogaster and its sibling species, Drosophila simulans, using six-cutter restriction site variation at yellow-achaete (y-ac), phosphogluconate dehydrogenase (Pgd), and period (per). These three gene regions are of varying distance from the telomere of the X chromosome and range from very low to moderate rates of recombination in D. melanogaster. According to Tajima's test of neutrality, the Pgd region has been influenced by balancing selection in D. melanogaster. This is consistent with previous data suggesting the allozyme polymorphism at this locus is visible to selection. The Hudson, Kreitman, Aguadé test of neutrality reveals a significant departure from neutrality for the y-ac region compared to the per or rosy regions in D. simulans. There is also a significant departure for the y-ac region compared to the Adh 5' flanking region in D. melanogaster. In both species the departure appears to be due to reduced variation at y-ac compared to that expected from divergence between D. simulans and D. melanogaster. We conclude that recent hitchhiking associated with the selective fixation of one or more advantageous mutants in the y-ac region is the best explanation for reduced variation at y-ac.

摘要

我们利用黄身-无刚毛(y-ac)、6-磷酸葡萄糖酸脱氢酶(Pgd)和周期蛋白(per)基因上六碱基切割限制酶切位点的变异,估算了黑腹果蝇及其近缘种拟果蝇内部和之间的DNA序列变异及分化情况。这三个基因区域与X染色体端粒的距离各不相同,在黑腹果蝇中的重组率范围从极低到中等。根据田岛中性检验,Pgd区域在黑腹果蝇中受到平衡选择的影响。这与之前的数据一致,表明该位点的等位酶多态性能够被选择所识别。哈德森、克赖特曼、阿瓜德中性检验显示,与拟果蝇中的per或朱红色区域相比,y-ac区域显著偏离中性。与黑腹果蝇中的乙醇脱氢酶(Adh)5'侧翼区域相比,y-ac区域也有显著偏离。在这两个物种中,这种偏离似乎是由于y-ac区域的变异相较于拟果蝇和黑腹果蝇之间的分化预期有所减少。我们得出结论,最近与y-ac区域中一个或多个有利突变的选择性固定相关的搭便车效应,是y-ac区域变异减少的最佳解释。

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Molecular population genetics of the distal portion of the X chromosome in Drosophila: evidence for genetic hitchhiking of the yellow-achaete region.果蝇X染色体远端部分的分子群体遗传学:黄-achaete区域遗传搭便车的证据。
Genetics. 1991 Dec;129(4):1147-58. doi: 10.1093/genetics/129.4.1147.
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本文引用的文献

1
The Interaction of Selection and Linkage. I. General Considerations; Heterotic Models.选择与连锁的相互作用。I. 一般考量;杂种优势模型。
Genetics. 1964 Jan;49(1):49-67. doi: 10.1093/genetics/49.1.49.
2
A Comprehensive Study of Genic Variation in Natural Populations of Drosophila melanogaster. III. Variations in Genetic Structure and Their Causes between Drosophila melanogaster and Its Sibling Species Drosophila simulans.自然群体中黑腹果蝇的基因变异的综合研究。III. 黑腹果蝇与其姊妹种拟暗果蝇之间遗传结构的变异及其原因。
Genetics. 1987 Dec;117(4):697-710. doi: 10.1093/genetics/117.4.697.
3
Evidence for biochemical and physiological differences between enzyme genotypes in Drosophila melanogaster.黑腹果蝇酶基因型之间生化和生理差异的证据。
Proc Natl Acad Sci U S A. 1981 Jul;78(7):4444-7. doi: 10.1073/pnas.78.7.4444.
4
Population bottlenecks and nonequilibrium models in population genetics. I. Allele numbers when populations evolve from zero variability.群体遗传学中的群体瓶颈与非平衡模型。I. 群体从零变异性开始进化时的等位基因数量。
Genetics. 1984 Nov;108(3):745-63. doi: 10.1093/genetics/108.3.745.
5
Chromosomal walking and jumping to isolate DNA from the Ace and rosy loci and the bithorax complex in Drosophila melanogaster.通过染色体步移和跳查从黑腹果蝇的Ace和玫瑰色基因座以及双胸复合体中分离DNA。
J Mol Biol. 1983 Jul 25;168(1):17-33. doi: 10.1016/s0022-2836(83)80320-9.
6
Estimating genetic variability with restriction endonucleases.用限制性内切酶估计遗传变异性。
Genetics. 1982 Apr;100(4):711-9. doi: 10.1093/genetics/100.4.711.
7
The hitch-hiking effect of a favourable gene.有利基因的搭便车效应。
Genet Res. 1974 Feb;23(1):23-35.
8
Molecular genetics of the achaete-scute gene complex of D. melanogaster.黑腹果蝇achaete-scute基因复合体的分子遗传学
Cell. 1985 Feb;40(2):327-38. doi: 10.1016/0092-8674(85)90147-3.
9
Effects of linkage on rates of molecular evolution.连锁对分子进化速率的影响。
Proc Natl Acad Sci U S A. 1988 Sep;85(17):6414-8. doi: 10.1073/pnas.85.17.6414.
10
Improved hybridization conditions for DNA 'fingerprints' probed with M13.用于用M13探测DNA“指纹”的改进杂交条件。
Nucleic Acids Res. 1988 May 11;16(9):4161. doi: 10.1093/nar/16.9.4161.